Factsheet for TraesCS3B01G262600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80300.1	TraesCS1A01G427400.1	AT2G42580.1	19000166
AT1G80300.1	TraesCS1B01G462300.1	AT2G42580.1	19000166
AT1G80300.1	TraesCS1D01G437100.1	AT2G42580.1	19000166
AT1G80300.1	TraesCS3A01G143000.1	AT2G42580.1	19000166
AT1G80300.1	TraesCS3A01G221800.1	AT2G42580.1	19000166
AT1G80300.1	TraesCS3B01G162100.1	AT2G42580.1	19000166
AT1G80300.1	TraesCS3B01G251600.1	AT2G42580.1	19000166
AT1G80300.1	TraesCS3D01G144600.1	AT2G42580.1	19000166
AT1G80300.1	TraesCS3D01G231300.1	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G233300.1	Wheat	plastid	95.66	95.66
HORVU3Hr1G058170.1	Barley	plastid	93.57	92.09
TraesCS3D01G219900.1	Wheat	golgi, unclear	91.32	84.78
EES03353	Sorghum	plastid	79.9	78.14
Os01t0647100-01	Rice	plastid	80.39	77.88
Zm00001d011471_P001	Maize	plastid	78.94	77.44
Zm00001d044060_P001	Maize	extracellular, plasma membrane	79.26	75.85
TraesCS6B01G206800.1	Wheat	golgi	71.06	71.29
GSMUA_Achr7P08430_001	Banana	plastid	62.86	69.08
Bra016656.1-P	Field mustard	plastid	66.24	67.54
Bra026126.1-P	Field mustard	plastid	66.08	67.49
CDX83974	Canola	plastid	66.08	67.49
CDX96838	Canola	plastid	66.4	67.48
Bra035190.1-P	Field mustard	mitochondrion, plastid	66.56	67.43
CDY36568	Canola	mitochondrion	66.08	67.38
CDX87299	Canola	mitochondrion, plastid	66.4	67.26
CDY39988	Canola	mitochondrion, plastid	66.4	67.15
CDY39658	Canola	mitochondrion	66.24	67.1
CDX79394	Canola	plastid	66.4	67.05
Bra003560.1-P	Field mustard	plastid	66.24	66.88
CDY57697	Canola	plastid	66.24	66.88
KRH44405	Soybean	endoplasmic reticulum	67.04	66.83
VIT_09s0002g05710.t01	Wine grape	plastid	66.56	66.67
KRH23529	Soybean	endoplasmic reticulum	65.92	66.67
PGSC0003DMT400014304	Potato	plastid	67.04	66.61
KRH09791	Soybean	extracellular	66.08	66.61
AT1G15500.1	Thale cress	mitochondrion	66.08	66.5
Solyc03g119970.2.1	Tomato	plastid	66.72	66.4
KRH47502	Soybean	mitochondrion	66.4	66.29
GSMUA_Achr2P16990_001	Banana	plastid	64.47	66.17
GSMUA_Achr10P...	Banana	mitochondrion	64.47	66.06
AT1G80300.1	Thale cress	plastid	66.08	65.87
PGSC0003DMT400073724	Potato	mitochondrion, plastid	66.56	65.61
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	66.08	65.34
Solyc08g066920.1.1	Tomato	cytosol	11.74	37.06

Protein Annotations

EnsemblPlants:TraesCS3B01G262600.1	EnsemblPlantsGene:TraesCS3B01G262600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575
GO:GO:0006810	GO:GO:0006862	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:ADP_ATP_car
PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	PFAM:PF03219	SEG:seg	TIGRFAMs:TIGR00769	TMHMM:TMhelix
MapMan:24.2.2.14	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:421236035..421240173

Molecular Weight (calculated)

67052.0 Da

IEP (calculated)

10.139

GRAVY (calculated)

0.415

Length

622 amino acids

Sequence
(BLAST)

001: MESLALLSAK PGLSLRAGPR LPLPRLRAAR ASLSTASSSR PAALQSPLLS SRAPSSQDAV LGYGLLKRRT SAGAGVSCSA AAAAAVPQPP AQPEVKKFLG
101: VGLPTLKKIV PLGLMFFCIL FNYTILRDTK DVLVVTAKGS SAEIIPFLKT WVNLPMAIGF MLAYSKLSDV LSREALFYTV IFPFIAFFGL FGFVLYPLRD
201: AIHPTALADK LLAALGPSFL GPVAILRIWS FCLFYVMAEL WGSVVVSVLF WGFANQITTV DEAKEFYPLF GLGANIALIF SGRTVKYFSN LRKTMGPGVD
301: GWEVSLKGMM GIVVLLGLVI TSIYWGVNKL VLNDPSLPKS DHKKKKNKPK LSMKESMKVL ISSKYVRDLA TLVVAYGISI NLVEVTWKSK LKAQFPSPNE
401: YSSFMGDFST ATGIATFTMM LLGRIIFQKF GWGVAAMITP TVLLVTGVGF FSLILFGQPL TPLLATWGMT PLLAAVYVGA LQNIFSKSAK YSLFDPCKEM
501: AYIPLDGDMK LKGKAAIDVV CNPLGKSGGA LIQQFLILIF GSLANSTPYL GGILLVIVLA WLGAARSLDK QFSSLAKEDL RKEMSKEKVE TAAPKEPEAA
601: TDVLVEQSNG TENSPSDSSP AQ

Best Arabidopsis Sequence Match ( AT1G80300.1 )
(BLAST)

001: MEAVIQTRGL LSLPTKPIGV RSQLQPSHGL KQRLFAAKPR NLHGLSLSFN GHKKFQTFEP TLHGISISHK ERSTEFICKA EAAAAGDGAV FGEGDSAAVV
101: ASPKIFGVEV ATLKKIIPLG LMFFCILFNY TILRDTKDVL VVTAKGSSAE IIPFLKTWVN LPMAIGFMLL YTKLSNVLSK KALFYTVIVP FIIYFGAFGF
201: VMYPLSNYIH PEALADKLLT TLGPRFMGPI AILRIWSFCL FYVMAELWGS VVVSVLFWGF ANQITTVDEA KKFYPLFGLG ANVALIFSGR TVKYFSNLRK
301: NLGPGVDGWA VSLKAMMSIV VGMGLAICLL YWWVNRYVPL PTRSKNKKEK PKMGTMESLK FLVSSPYIRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP
401: NEYSAFMGDF STCTGVATFT MMLLSQYVFN KYGWGVAAKI TPTVLLLTGV AFFSLILFGG PFAPLVAKLG MTPLLAAVYV GALQNIFSKS AKYSLFDPCK
501: EMAYIPLDED TKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGMILLVIV TAWLAAAKSL EGQFNSLRSE EELEKEMERA SSVKIPVVSQ
601: DESGNGSLGE SPSSSPEKSA PTNL

Arabidopsis Description

AATP1ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.