Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40817 | Soybean | cytosol | 91.67 | 86.84 |
| KRH65508 | Soybean | cytosol | 77.78 | 76.71 |
| VIT_08s0058g00800.t01 | Wine grape | cytosol | 68.75 | 62.26 |
| PGSC0003DMT400068444 | Potato | cytosol | 58.33 | 56.0 |
| Solyc09g014940.1.1 | Tomato | cytosol | 57.64 | 50.61 |
| GSMUA_Achr3P17980_001 | Banana | cytosol | 50.0 | 50.0 |
| GSMUA_Achr9P04720_001 | Banana | cytosol | 47.22 | 46.26 |
| TraesCS2A01G091800.1 | Wheat | cytosol | 47.22 | 44.16 |
| TraesCS2D01G089100.1 | Wheat | cytosol | 33.33 | 44.04 |
| TraesCS2D01G090900.1 | Wheat | cytosol | 46.53 | 43.79 |
| TraesCS2B01G106700.1 | Wheat | extracellular | 32.64 | 43.12 |
| TraesCS2B01G106800.1 | Wheat | cytosol | 45.83 | 42.58 |
| KRG98194 | Soybean | cytosol | 48.61 | 42.17 |
| KRH30154 | Soybean | cytosol | 47.22 | 41.72 |
| TraesCS2A01G091300.1 | Wheat | cytosol | 44.44 | 40.51 |
| KRG97665 | Soybean | cytosol | 41.67 | 37.97 |
| Os05t0342100-01 | Rice | cytosol | 45.83 | 37.29 |
| KRH30153 | Soybean | cytosol | 37.5 | 36.73 |
| KRH17129 | Soybean | cytosol | 38.89 | 35.0 |
| KRH31209 | Soybean | cytosol | 41.67 | 34.88 |
| KRG98193 | Soybean | cytosol | 36.81 | 32.52 |
Protein Annotations
| EMBL:ACUP02011440 | EnsemblPlants:KRH00378 | EnsemblPlantsGene:GLYMA_18G209500 | EntrezGene:100795464 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf |
| InterPro:Wun1-like | PANTHER:PTHR33703 | PANTHER:PTHR33703:SF1 | PFAM:PF07107 | ProteinID:KRH00378 | ProteinID:KRH00378.1 |
| SUPFAM:SSF54427 | UniParc:UPI000233F55E | UniProt:I1N348 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr18:+:49448486..49449217
Molecular Weight (calculated)
16867.3 Da
IEP (calculated)
6.793
GRAVY (calculated)
-0.388
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNKATVEML YMALLGQETM DNVAKLLASD LEWWFHGPPQ CHHMMKVLTG ETDHTKGFRF EPKQVTAIGD CVIAEGWEGK AYWVHVWTLK NGLITQFREY
101: FNTWLVVRDL RTPRREDSKD SMTLWESQPR DLYHRSLPGL VLTI
101: FNTWLVVRDL RTPRREDSKD SMTLWESQPR DLYHRSLPGL VLTI
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.