Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G090900.1 | Wheat | cytosol | 87.01 | 87.58 |
| TraesCS2A01G091300.1 | Wheat | cytosol | 78.57 | 76.58 |
| TraesCS2B01G106800.1 | Wheat | cytosol | 75.97 | 75.48 |
| GSMUA_Achr9P04720_001 | Banana | cytosol | 56.49 | 59.18 |
| GSMUA_Achr3P17980_001 | Banana | cytosol | 55.19 | 59.03 |
| Os05t0342100-01 | Rice | cytosol | 54.55 | 47.46 |
| KRH00378 | Soybean | cytosol | 44.16 | 47.22 |
| KRH65508 | Soybean | cytosol | 44.16 | 46.58 |
| KRH40817 | Soybean | cytosol | 44.81 | 45.39 |
| Bra028909.1-P | Field mustard | cytosol | 44.81 | 43.12 |
| TraesCS2A01G092200.1 | Wheat | mitochondrion | 27.92 | 42.57 |
| CDY04831 | Canola | cytosol | 44.16 | 42.5 |
| VIT_08s0058g00800.t01 | Wine grape | cytosol | 43.51 | 42.14 |
| AT5G01740.1 | Thale cress | cytosol | 42.86 | 40.74 |
| PGSC0003DMT400068444 | Potato | cytosol | 39.61 | 40.67 |
| Solyc09g014940.1.1 | Tomato | cytosol | 39.61 | 37.2 |
| KRG98194 | Soybean | cytosol | 39.61 | 36.75 |
| KRH30154 | Soybean | cytosol | 37.01 | 34.97 |
| TraesCS4A01G115600.1 | Wheat | mitochondrion | 28.57 | 32.59 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G091800.1 | EnsemblPlantsGene:TraesCS2A01G091800 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:Wun1-like | PANTHER:PTHR33703 |
| PANTHER:PTHR33703:SF10 | PFAM:PF07107 | SEG:seg | SUPFAM:SSF54427 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2A:+:44797893..44798357
Molecular Weight (calculated)
17166.4 Da
IEP (calculated)
7.674
GRAVY (calculated)
-0.171
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKHAPSKSN REVVESLYAS LARGDAAAVT ALLAADLDWW FHGPRRCQHM RRLLTGEAAG AVAFRFMPTR VAEVGSAMDG QWVVAEGWAG EHDYWVHAWC
101: LHDGIITNFR EYFNTSVTVR NLGQTAKEDV VWAIWESQSP RPKSRSMPGL VLAI
101: LHDGIITNFR EYFNTSVTVR NLGQTAKEDV VWAIWESQSP RPKSRSMPGL VLAI
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.