Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028909.1-P | Field mustard | cytosol | 98.75 | 98.75 |
| AT5G01740.1 | Thale cress | cytosol | 83.75 | 82.72 |
| GSMUA_Achr3P17980_001 | Banana | cytosol | 44.38 | 49.31 |
| GSMUA_Achr9P04720_001 | Banana | cytosol | 45.0 | 48.98 |
| TraesCS2A01G091800.1 | Wheat | cytosol | 42.5 | 44.16 |
| TraesCS2D01G090900.1 | Wheat | cytosol | 41.25 | 43.14 |
| TraesCS2A01G091300.1 | Wheat | cytosol | 41.25 | 41.77 |
| TraesCS2B01G106800.1 | Wheat | cytosol | 40.0 | 41.29 |
| KRG98194 | Soybean | cytosol | 42.5 | 40.96 |
| KRH30154 | Soybean | cytosol | 41.25 | 40.49 |
| CDY00710 | Canola | extracellular | 26.25 | 40.38 |
| TraesCS2D01G089100.1 | Wheat | cytosol | 27.5 | 40.37 |
| TraesCS2B01G106700.1 | Wheat | extracellular | 26.88 | 39.45 |
| CDX73898 | Canola | extracellular | 25.62 | 39.42 |
| Os05t0342100-01 | Rice | cytosol | 41.88 | 37.85 |
| CDY00985 | Canola | cytosol | 38.12 | 35.67 |
| CDY08559 | Canola | cytosol, plasma membrane | 37.5 | 29.13 |
Protein Annotations
| EnsemblPlants:CDY04831 | EnsemblPlantsGene:GSBRNA2T00119543001 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:Wun1-like | PANTHER:PTHR33703 |
| PANTHER:PTHR33703:SF1 | PFAM:PF07107 | ProteinID:CDY04831 | ProteinID:CDY04831.1 | SUPFAM:SSF54427 | UniParc:UPI0004EE09BA |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaAnng00130D
Coordinates
chrLK031958:-:153575..154225
Molecular Weight (calculated)
18093.6 Da
IEP (calculated)
5.913
GRAVY (calculated)
-0.189
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAHNVERLT TPEMKNRGNI ELLYRALQQG DASTVAKLVA SDVEWWFHGP HNCQHMMRLL TGEPPSQVSF RFEPSTVQVV VPGHGCVIAE GWEGSQVYWV
101: HVWKLKDGVV TELREYFNTW ITVTDYSRGA IGWDMGGCTV WESVPRDLPR GSLPSLLLAI
101: HVWKLKDGVV TELREYFNTW ITVTDYSRGA IGWDMGGCTV WESVPRDLPR GSLPSLLLAI
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.