Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY04831 | Canola | cytosol | 98.75 | 98.75 |
AT5G01740.1 | Thale cress | cytosol | 83.75 | 82.72 |
GSMUA_Achr9P04720_001 | Banana | cytosol | 45.62 | 49.66 |
GSMUA_Achr3P17980_001 | Banana | cytosol | 43.12 | 47.92 |
TraesCS2A01G091800.1 | Wheat | cytosol | 43.12 | 44.81 |
TraesCS2D01G090900.1 | Wheat | cytosol | 41.88 | 43.79 |
TraesCS2A01G091300.1 | Wheat | cytosol | 41.88 | 42.41 |
KRG98194 | Soybean | cytosol | 43.12 | 41.57 |
Bra034157.1-P | Field mustard | extracellular | 26.88 | 41.35 |
TraesCS2B01G106800.1 | Wheat | cytosol | 40.0 | 41.29 |
KRH30154 | Soybean | cytosol | 41.88 | 41.1 |
TraesCS2D01G089100.1 | Wheat | cytosol | 27.5 | 40.37 |
TraesCS2B01G106700.1 | Wheat | extracellular | 26.88 | 39.45 |
Os05t0342100-01 | Rice | cytosol | 41.88 | 37.85 |
Bra029887.1-P | Field mustard | cytosol | 38.12 | 32.45 |
Protein Annotations
EnsemblPlants:Bra028909.1 | EnsemblPlants:Bra028909.1-P | EnsemblPlantsGene:Bra028909 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:Wun1-like |
PANTHER:PTHR33703 | PANTHER:PTHR33703:SF1 | PFAM:PF07107 | SUPFAM:SSF54427 | UniParc:UPI00025435C8 | UniProt:M4EJE3 |
MapMan:35.2 | : | : | : | : | : |
Description
AT5G01740 (E=2e-081) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: SAG20 (SENESCENCE ASSOCIATED GENE 20) (TAIR:AT3G10985.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA02:-:1464744..1465226
Molecular Weight (calculated)
18151.6 Da
IEP (calculated)
5.542
GRAVY (calculated)
-0.209
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAHNVERLT TPEMKNRENI ELLYRALQQG DASTVAKLVA SDVEWWFHGP HNCQHMMRLL TGEPPSQVSF RFEPSSVQVV VPGHGCVIAE GWEGSQVYWV
101: HVWKLKDGVV TELREYFNTW ITVTDYSRGA IGWDMGGCTV WESVPRDLPR GSLPSLLLAI
101: HVWKLKDGVV TELREYFNTW ITVTDYSRGA IGWDMGGCTV WESVPRDLPR GSLPSLLLAI
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.