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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04831 Canola cytosol 98.75 98.75
AT5G01740.1 Thale cress cytosol 83.75 82.72
GSMUA_Achr9P04720_001 Banana cytosol 45.62 49.66
GSMUA_Achr3P17980_001 Banana cytosol 43.12 47.92
TraesCS2A01G091800.1 Wheat cytosol 43.12 44.81
TraesCS2D01G090900.1 Wheat cytosol 41.88 43.79
TraesCS2A01G091300.1 Wheat cytosol 41.88 42.41
KRG98194 Soybean cytosol 43.12 41.57
Bra034157.1-P Field mustard extracellular 26.88 41.35
TraesCS2B01G106800.1 Wheat cytosol 40.0 41.29
KRH30154 Soybean cytosol 41.88 41.1
TraesCS2D01G089100.1 Wheat cytosol 27.5 40.37
TraesCS2B01G106700.1 Wheat extracellular 26.88 39.45
Os05t0342100-01 Rice cytosol 41.88 37.85
Bra029887.1-P Field mustard cytosol 38.12 32.45
Protein Annotations
EnsemblPlants:Bra028909.1EnsemblPlants:Bra028909.1-PEnsemblPlantsGene:Bra028909Gene3D:3.10.450.50InterPro:NTF2-like_dom_sfInterPro:Wun1-like
PANTHER:PTHR33703PANTHER:PTHR33703:SF1PFAM:PF07107SUPFAM:SSF54427UniParc:UPI00025435C8UniProt:M4EJE3
MapMan:35.2:::::
Description
AT5G01740 (E=2e-081) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: SAG20 (SENESCENCE ASSOCIATED GENE 20) (TAIR:AT3G10985.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA02:-:1464744..1465226
Molecular Weight (calculated)
18151.6 Da
IEP (calculated)
5.542
GRAVY (calculated)
-0.209
Length
160 amino acids
Sequence
(BLAST)
001: MEAHNVERLT TPEMKNRENI ELLYRALQQG DASTVAKLVA SDVEWWFHGP HNCQHMMRLL TGEPPSQVSF RFEPSSVQVV VPGHGCVIAE GWEGSQVYWV
101: HVWKLKDGVV TELREYFNTW ITVTDYSRGA IGWDMGGCTV WESVPRDLPR GSLPSLLLAI
Best Arabidopsis Sequence Match ( AT5G01740.1 )
(BLAST)
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.