Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G091800.1 | Wheat | cytosol | 75.48 | 75.97 |
TraesCS2B01G106700.1 | Wheat | extracellular | 51.61 | 73.39 |
TraesCS2D01G090900.1 | Wheat | cytosol | 71.61 | 72.55 |
GSMUA_Achr3P17980_001 | Banana | cytosol | 52.26 | 56.25 |
GSMUA_Achr9P04720_001 | Banana | cytosol | 51.61 | 54.42 |
KRH00378 | Soybean | cytosol | 42.58 | 45.83 |
Os05t0342100-01 | Rice | cytosol | 50.97 | 44.63 |
KRH40817 | Soybean | cytosol | 43.23 | 44.08 |
KRH65508 | Soybean | cytosol | 41.29 | 43.84 |
VIT_08s0058g00800.t01 | Wine grape | cytosol | 44.52 | 43.4 |
TraesCS2B01G107100.1 | Wheat | mitochondrion | 27.1 | 41.58 |
CDY04831 | Canola | cytosol | 41.29 | 40.0 |
Bra028909.1-P | Field mustard | cytosol | 41.29 | 40.0 |
PGSC0003DMT400068444 | Potato | cytosol | 37.42 | 38.67 |
AT5G01740.1 | Thale cress | cytosol | 40.0 | 38.27 |
Solyc09g014940.1.1 | Tomato | cytosol | 38.06 | 35.98 |
KRG98194 | Soybean | cytosol | 36.13 | 33.73 |
KRH30154 | Soybean | cytosol | 33.55 | 31.9 |
TraesCS4B01G188400.1 | Wheat | cytosol | 36.13 | 30.6 |
Protein Annotations
EnsemblPlants:TraesCS2B01G106800.1 | EnsemblPlantsGene:TraesCS2B01G106800 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:Wun1-like | PANTHER:PTHR33703 |
PANTHER:PTHR33703:SF10 | PFAM:PF07107 | SEG:seg | SUPFAM:SSF54427 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2B:+:67915273..67915740
Molecular Weight (calculated)
17197.5 Da
IEP (calculated)
7.215
GRAVY (calculated)
-0.094
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMHARSKSN SMVESLYASL ARGDVAAVAV LLAADLDWWF HGPHRCQHMR RLLAGEVKGA LAFRFAPARV EEVGGAAEGD EQWVVAEGWA GEHDYWVHAW
101: CLRAGVITSF HEYFNTSVTV RKLGQPAKED VVWAIWESQS PRPRGRSMPG LVLAI
101: CLRAGVITSF HEYFNTSVTV RKLGQPAKED VVWAIWESQS PRPRGRSMPG LVLAI
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.