Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00378 | Soybean | cytosol | 62.26 | 68.75 |
| KRH40817 | Soybean | cytosol | 65.41 | 68.42 |
| KRH65508 | Soybean | cytosol | 60.38 | 65.75 |
| PGSC0003DMT400068444 | Potato | cytosol | 59.75 | 63.33 |
| Solyc09g014940.1.1 | Tomato | cytosol | 58.49 | 56.71 |
| GSMUA_Achr3P17980_001 | Banana | cytosol | 47.8 | 52.78 |
| GSMUA_Achr9P04720_001 | Banana | cytosol | 46.54 | 50.34 |
| TraesCS2B01G106800.1 | Wheat | cytosol | 43.4 | 44.52 |
| TraesCS2D01G090900.1 | Wheat | cytosol | 42.14 | 43.79 |
| TraesCS2A01G091800.1 | Wheat | cytosol | 42.14 | 43.51 |
| TraesCS2A01G091300.1 | Wheat | cytosol | 42.14 | 42.41 |
| TraesCS2B01G106700.1 | Wheat | extracellular | 28.93 | 42.2 |
| TraesCS2D01G089100.1 | Wheat | cytosol | 28.93 | 42.2 |
| Os05t0342100-01 | Rice | cytosol | 46.54 | 41.81 |
| VIT_06s0004g07550.t01 | Wine grape | extracellular, vacuole | 40.25 | 28.7 |
Protein Annotations
| EntrezGene:100260135 | wikigene:100260135 | Gene3D:3.10.450.50 | MapMan:35.2 | ProteinID:CCB44799 | ProteinID:CCB44799.1 |
| UniProt:F6GXZ8 | EMBL:FN594967 | EntrezGene:LOC100260135 | wikigene:LOC100260135 | InterPro:NTF2-like_dom_sf | PFAM:PF07107 |
| PANTHER:PTHR33703 | PANTHER:PTHR33703:SF1 | SUPFAM:SSF54427 | TIGR:TC55193 | UniParc:UPI0001983B76 | ArrayExpress:VIT_08s0058g00800 |
| EnsemblPlantsGene:VIT_08s0058g00800 | EnsemblPlants:VIT_08s0058g00800.t01 | unigene:Vvi.19342 | InterPro:Wun1-like | RefSeq:XP_003632589 | RefSeq:XP_003632589.1 |
Description
No Description!
Coordinates
chr8:+:9963837..9964508
Molecular Weight (calculated)
18177.6 Da
IEP (calculated)
4.669
GRAVY (calculated)
-0.214
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNDIEYSS MSMEVESQDK ANVIELYNAL ANGDTQIVAG LLASDLEWWF HGPPLCQHMM RVLTGESVHT EFKFEPRSIT AIDGCVIAEG WEGAQAYWVH
101: VWTLKNGLIT QFREYFNTWL TVRDLRPAEW EVRHESPTLW QSQPRDLAKR SLPGLLLAI
101: VWTLKNGLIT QFREYFNTWL TVRDLRPAEW EVRHESPTLW QSQPRDLAKR SLPGLLLAI
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.