Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- plasma membrane 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g014940.1.1 | Tomato | cytosol | 92.0 | 84.15 |
| VIT_08s0058g00800.t01 | Wine grape | cytosol | 63.33 | 59.75 |
| KRH00378 | Soybean | cytosol | 56.0 | 58.33 |
| KRH65508 | Soybean | cytosol | 56.67 | 58.22 |
| KRH40817 | Soybean | cytosol | 58.0 | 57.24 |
| GSMUA_Achr3P17980_001 | Banana | cytosol | 46.67 | 48.61 |
| GSMUA_Achr9P04720_001 | Banana | cytosol | 44.67 | 45.58 |
| TraesCS2A01G091800.1 | Wheat | cytosol | 40.67 | 39.61 |
| TraesCS2D01G090900.1 | Wheat | cytosol | 40.0 | 39.22 |
| TraesCS2B01G106700.1 | Wheat | extracellular | 28.0 | 38.53 |
| TraesCS2D01G089100.1 | Wheat | cytosol | 28.0 | 38.53 |
| PGSC0003DMT400046104 | Potato | cytosol | 28.67 | 38.39 |
| TraesCS2A01G091300.1 | Wheat | cytosol | 40.0 | 37.97 |
| TraesCS2B01G106800.1 | Wheat | cytosol | 38.67 | 37.42 |
| Os05t0342100-01 | Rice | cytosol | 41.33 | 35.03 |
| PGSC0003DMT400017004 | Potato | extracellular, plasma membrane, plastid | 40.67 | 28.64 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400068444 | EnsemblPlantsGene:PGSC0003DMG400026616 | EntrezGene:102582014 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:Wun1-like |
| PANTHER:PTHR33703 | PANTHER:PTHR33703:SF1 | PFAM:PF07107 | PGSC:PGSC0003DMG400026616 | RefSeq:XP_006359800.1 | SUPFAM:SSF54427 |
| UniParc:UPI0002968F71 | UniProt:M1CJ19 | MapMan:35.2 | : | : | : |
Description
Wound-induced protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026616]
Coordinates
chr9:+:12067751..12068561
Molecular Weight (calculated)
17452.8 Da
IEP (calculated)
8.075
GRAVY (calculated)
-0.409
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSERENNNK AIVKTLYKAL ACTCGDTKKV TGIIVDDLEW WFHGPQNCHY LMKLLTGEQS NNNNSFKFEP RSVDAIDDRV IVEGWEGAKA YWVHVWTFKD
101: GVITQFREYF NTWLTVTELR PMGWLRSTTL WQSHPRDLAK RSLPGLMLAI
101: GVITQFREYF NTWLTVTELR PMGWLRSTTL WQSHPRDLAK RSLPGLMLAI
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.