Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G089100.1 | Wheat | cytosol | 90.83 | 90.83 |
| TraesCS2A01G091300.1 | Wheat | cytosol | 88.99 | 61.39 |
| TraesCS2B01G106800.1 | Wheat | cytosol | 73.39 | 51.61 |
| TraesCS2B01G107100.1 | Wheat | mitochondrion | 37.61 | 40.59 |
| GSMUA_Achr9P04720_001 | Banana | cytosol | 54.13 | 40.14 |
| GSMUA_Achr3P17980_001 | Banana | cytosol | 51.38 | 38.89 |
| KRH00378 | Soybean | cytosol | 43.12 | 32.64 |
| Os05t0342100-01 | Rice | cytosol | 52.29 | 32.2 |
| KRH40817 | Soybean | cytosol | 43.12 | 30.92 |
| KRH65508 | Soybean | cytosol | 41.28 | 30.82 |
| VIT_08s0058g00800.t01 | Wine grape | cytosol | 42.2 | 28.93 |
| PGSC0003DMT400068444 | Potato | cytosol | 38.53 | 28.0 |
| CDY04831 | Canola | cytosol | 39.45 | 26.88 |
| Bra028909.1-P | Field mustard | cytosol | 39.45 | 26.88 |
| AT5G01740.1 | Thale cress | cytosol | 39.45 | 26.54 |
| Solyc09g014940.1.1 | Tomato | cytosol | 39.45 | 26.22 |
| KRG98194 | Soybean | cytosol | 37.61 | 24.7 |
| KRH30154 | Soybean | cytosol | 35.78 | 23.93 |
| TraesCS4B01G188400.1 | Wheat | cytosol | 34.86 | 20.77 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G106700.1 | EnsemblPlantsGene:TraesCS2B01G106700 | InterPro:NTF2-like_dom_sf | InterPro:Wun1-like | PANTHER:PTHR33703 | PANTHER:PTHR33703:SF10 |
| PFAM:PF07107 | SUPFAM:SSF54427 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:67733705..67734034
Molecular Weight (calculated)
12140.6 Da
IEP (calculated)
5.716
GRAVY (calculated)
-0.006
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCMLTGEAV GAMAFRFVPT RMVEVGCTTE GEDGWVVAEG WTGVGERDYW VHAWCLHAGV ITSFREYFNT SVTVRELGRP AKEDVVWAVW ESQSPKTKGR
101: SMPGLVLAI
101: SMPGLVLAI
001: MRVLTGGVSP SSSSFEFVPL SVVSFGSTVI AEGCDAATSI SWIHAWTVAN GIITQVREYS NTSLTVTRIG NVVAGRRSAE IAPPSHCSSV WESQFSGRAG
101: KPVPGLVLAI
101: KPVPGLVLAI
Arabidopsis Description
SAG20Senescence associated gene 20 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.