Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G368600.1 | Wheat | plasma membrane | 30.03 | 13.64 |
| TraesCS7B01G174700.1 | Wheat | golgi | 19.49 | 9.36 |
| TraesCS2B01G477400.1 | Wheat | golgi | 17.57 | 8.96 |
| TraesCS2B01G209800.1 | Wheat | golgi | 12.78 | 6.54 |
| TraesCS7B01G258200.1 | Wheat | golgi | 10.54 | 6.4 |
| TraesCS4B01G252500.1 | Wheat | plasma membrane | 10.22 | 5.47 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G368700.1 | EnsemblPlantsGene:TraesCS5B01G368700 | PANTHER:PTHR22883 | PANTHER:PTHR22883:SF221 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr5B:+:546866980..546868655
Molecular Weight (calculated)
34067.8 Da
IEP (calculated)
10.464
GRAVY (calculated)
-0.722
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSTVDPDA AGYAERANKA KKPVKISARS LAKPERNEVM KAAAKARASS SILRPIDARH GNEADISSSG NANVRSSMSV DYSATKESRS EMLLFPLRNL
101: YPQSLASYDD YETGTQTANS LNSPVHIHKF APHAQFRVAP HPAPPPKRPA LGITRPHVPA THISNNPMFQ SATSYVRENR RASVVWDQEA GRYVSVPMQT
201: TRTGPGVELP ARNPSFLVNP SGEPGNHGRN LAPANTTSSA IPSGQLSERL TYTGQSIFFG GPILSTTGIN EERNEAGTRV RPETSRDPNS HQRDIRGEKA
301: RTGSFPLYEP RNF
101: YPQSLASYDD YETGTQTANS LNSPVHIHKF APHAQFRVAP HPAPPPKRPA LGITRPHVPA THISNNPMFQ SATSYVRENR RASVVWDQEA GRYVSVPMQT
201: TRTGPGVELP ARNPSFLVNP SGEPGNHGRN LAPANTTSSA IPSGQLSERL TYTGQSIFFG GPILSTTGIN EERNEAGTRV RPETSRDPNS HQRDIRGEKA
301: RTGSFPLYEP RNF
001: MVRKHGWQLP AHTLQVIAIT VFCLLVVAFY AFFAPFVGGR IWEYVLIGVY SPVAILVFVL YVRCTAINPA DPRIMSIFDT GVNGDGMVRG LSRNYDETGS
101: QLQASPSVVS RSSTVAGNSS VKGSVEDAQR VESVSRRSCY NPLAVFCYVF VVEDCRKKEG PAEEQGNSEE ALFCTLCNCE VRKFSKHCRS CDKCVDCFDH
201: HCKWLNNCVG RKNYVTFVSL MSASLLWLII EAAVGIAVIV RVFVNKQTME TEIVNRLGNS FSRAPLAAVV GLCTAVAIFA CFPLGELLFF HMLLIKKGIT
301: TYEYVVAMRA MSEAPDGASV DEEIQNVLYS PTGSATTGFS GGSSLGLPYR GVWCTPPRVF DNQDEVIPHL DPCMVPSTVD PDAPGSEKGT KALKRPVKRN
401: AWKLAKLDPN EAARAAARAR ASSSVLRPID NRHLPDNDLS SIGTVSIISS VSTDANVAAS KEIRNNDLRS SLSRNSFAPS QGSRDEYDTG SHGMSNLSSP
501: SHVHESVTLA PLPQNPTIVG NRFTATSHHM HSTFDDKVLH RGNDADPLFL FAPATSHLRD VRKTSVVWDP EAGRYVSAPV TTTSEVRNRL LNPSSQTAST
601: QNPRPILPAH DSSSGSSALR DPLPLHQAER RLTYTGDSIF YGGPLINIPT RDTPRSGRGL VRDVQDRLAS TVHRDARIRR DSTSNQLPVF APGGLGANSQ
701: TGSNIK
101: QLQASPSVVS RSSTVAGNSS VKGSVEDAQR VESVSRRSCY NPLAVFCYVF VVEDCRKKEG PAEEQGNSEE ALFCTLCNCE VRKFSKHCRS CDKCVDCFDH
201: HCKWLNNCVG RKNYVTFVSL MSASLLWLII EAAVGIAVIV RVFVNKQTME TEIVNRLGNS FSRAPLAAVV GLCTAVAIFA CFPLGELLFF HMLLIKKGIT
301: TYEYVVAMRA MSEAPDGASV DEEIQNVLYS PTGSATTGFS GGSSLGLPYR GVWCTPPRVF DNQDEVIPHL DPCMVPSTVD PDAPGSEKGT KALKRPVKRN
401: AWKLAKLDPN EAARAAARAR ASSSVLRPID NRHLPDNDLS SIGTVSIISS VSTDANVAAS KEIRNNDLRS SLSRNSFAPS QGSRDEYDTG SHGMSNLSSP
501: SHVHESVTLA PLPQNPTIVG NRFTATSHHM HSTFDDKVLH RGNDADPLFL FAPATSHLRD VRKTSVVWDP EAGRYVSAPV TTTSEVRNRL LNPSSQTAST
601: QNPRPILPAH DSSSGSSALR DPLPLHQAER RLTYTGDSIF YGGPLINIPT RDTPRSGRGL VRDVQDRLAS TVHRDARIRR DSTSNQLPVF APGGLGANSQ
701: TGSNIK
Arabidopsis Description
PAT20Probable protein S-acyltransferase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIE4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.