Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80039 | Canola | cytosol | 98.36 | 98.36 |
| AT2G46690.1 | Thale cress | cytosol | 86.07 | 86.78 |
| CDY48020 | Canola | cytosol | 44.26 | 84.38 |
| KRH68946 | Soybean | cytosol | 50.82 | 66.67 |
| CDX76596 | Canola | nucleus | 63.93 | 65.55 |
| CDY11381 | Canola | cytosol | 61.48 | 63.03 |
| KRH06402 | Soybean | cytosol | 59.84 | 62.93 |
| KRH47836 | Soybean | cytosol | 59.02 | 62.61 |
| Solyc01g096340.2.1 | Tomato | cytosol | 55.74 | 62.39 |
| PGSC0003DMT400000365 | Potato | cytosol | 53.28 | 59.63 |
| KRG97226 | Soybean | cytosol | 51.64 | 54.78 |
| KRH47837 | Soybean | cytosol | 52.46 | 52.46 |
| KRH06403 | Soybean | cytosol | 52.46 | 52.03 |
| CDY07152 | Canola | cytosol | 56.56 | 51.88 |
| CDY47081 | Canola | cytosol | 33.61 | 47.67 |
| CDY53473 | Canola | extracellular | 42.62 | 44.07 |
| CDY28827 | Canola | cytosol | 43.44 | 41.41 |
| CDY51792 | Canola | cytosol | 42.62 | 40.62 |
| CDY65616 | Canola | cytosol | 27.87 | 39.53 |
| CDY20244 | Canola | cytosol | 41.8 | 38.06 |
| CDY14366 | Canola | cytosol | 40.98 | 33.33 |
| CDX94106 | Canola | mitochondrion | 32.79 | 26.32 |
| CDX98761 | Canola | mitochondrion | 31.97 | 25.66 |
| CDY71452 | Canola | mitochondrion | 32.79 | 25.16 |
| CDX95640 | Canola | mitochondrion | 32.79 | 24.84 |
| CDX95639 | Canola | mitochondrion | 32.79 | 24.84 |
| CDX83393 | Canola | mitochondrion | 32.79 | 24.84 |
| CDX76364 | Canola | mitochondrion | 31.97 | 24.53 |
| CDY52310 | Canola | mitochondrion | 31.97 | 24.38 |
| CDX79167 | Canola | mitochondrion | 31.97 | 24.38 |
| CDX86707 | Canola | mitochondrion | 31.15 | 23.75 |
| CDY41147 | Canola | mitochondrion | 32.79 | 23.53 |
| CDX71789 | Canola | mitochondrion | 32.79 | 23.53 |
| CDY21268 | Canola | mitochondrion | 31.15 | 23.03 |
| CDX90829 | Canola | mitochondrion | 31.15 | 23.03 |
| CDX97341 | Canola | mitochondrion | 27.05 | 22.6 |
| CDY48371 | Canola | mitochondrion | 31.15 | 22.35 |
| CDX89071 | Canola | mitochondrion | 31.15 | 22.35 |
| CDX89069 | Canola | mitochondrion | 31.15 | 22.35 |
Protein Annotations
| EnsemblPlants:CDY41548 | EnsemblPlantsGene:GSBRNA2T00073180001 | GO:A0A078HXV0 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF29 | PFAM:PF02519 | ProteinID:CDY41548 | ProteinID:CDY41548.1 |
| UniParc:UPI0004EB92E4 | UniProt:A0A078HXV0 | MapMan:35.1 | : | : | : |
Description
BnaC04g00740DBnaC04g00740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXV0]
Coordinates
chrLK032500:+:100347..101058
Molecular Weight (calculated)
14104.1 Da
IEP (calculated)
9.163
GRAVY (calculated)
-0.539
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTGEKNLKS FHLHRKQTVK NKDIPKGCLA IKVGSQGEEQ QRFIVPILYF NHPLFMQLLK EAEDEYGFDQ KGTITIPCHV AEFRYVQALI DGERMVYHGN
101: KNHLHKHSGR ELYHPLVGCF RA
101: KNHLHKHSGR ELYHPLVGCF RA
001: MGTGEKTLKS FQLHRKQSVK VKDVPKGCLA IKVGSQGEEQ QRFIVPVLYF NHPLFMQLLK EAEDEYGFDQ KGTITIPCHV EEFRYVQALI DGERSVYNGN
101: NHHHRHGGRD QYHHLVGCFR A
101: NHHHRHGGRD QYHHLVGCFR A
Arabidopsis Description
SAUR32Auxin-responsive protein SAUR32 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.