Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000365 | Potato | cytosol | 95.41 | 95.41 |
| VIT_15s0048g02860.t01 | Wine grape | cytosol | 66.97 | 63.48 |
| KRH68946 | Soybean | cytosol | 53.21 | 62.37 |
| KRH06402 | Soybean | cytosol | 63.3 | 59.48 |
| KRH47836 | Soybean | cytosol | 62.39 | 59.13 |
| AT2G46690.1 | Thale cress | cytosol | 65.14 | 58.68 |
| CDX76596 | Canola | nucleus | 61.47 | 56.3 |
| Solyc03g082510.1.1 | Tomato | cytosol | 58.72 | 56.14 |
| CDY41548 | Canola | cytosol | 62.39 | 55.74 |
| Bra039264.1-P | Field mustard | cytosol | 60.55 | 55.46 |
| CDY11381 | Canola | cytosol | 60.55 | 55.46 |
| Bra007639.1-P | Field mustard | cytosol | 60.55 | 55.46 |
| Bra004515.1-P | Field mustard | cytosol | 61.47 | 54.92 |
| CDX80039 | Canola | cytosol | 61.47 | 54.92 |
| Solyc06g053290.1.1 | Tomato | cytosol, nucleus, peroxisome | 56.88 | 53.91 |
| CDY48020 | Canola | cytosol | 29.36 | 50.0 |
| KRG97226 | Soybean | cytosol | 50.46 | 47.83 |
| KRH06403 | Soybean | cytosol | 53.21 | 47.15 |
| KRH47837 | Soybean | cytosol | 51.38 | 45.9 |
| AT3G61900.1 | Thale cress | cytosol | 55.05 | 44.12 |
| Solyc03g082520.1.1 | Tomato | cytosol | 45.87 | 42.73 |
| Solyc03g082530.1.1 | Tomato | cytosol, nucleus, plastid | 46.79 | 41.8 |
| Solyc06g053260.1.1 | Tomato | cytosol | 47.71 | 40.31 |
| Solyc05g056440.1.1 | Tomato | cytosol | 31.19 | 32.38 |
| Solyc05g056430.1.1 | Tomato | cytosol | 29.36 | 30.77 |
| Solyc10g018340.1.1 | Tomato | mitochondrion | 36.7 | 28.99 |
| Solyc08g079130.1.1 | Tomato | mitochondrion | 34.86 | 28.36 |
| Solyc08g079140.1.1 | Tomato | mitochondrion | 37.61 | 27.7 |
| Solyc01g091030.2.1 | Tomato | mitochondrion | 39.45 | 27.04 |
| Solyc08g079150.1.1 | Tomato | mitochondrion | 34.86 | 23.46 |
Protein Annotations
| EnsemblPlants:Solyc01g096340.2.1 | EnsemblPlantsGene:Solyc01g096340.2 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF29 | PFAM:PF02519 | UniParc:UPI00027678A2 | UniProt:K4B022 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:+:87414601..87415334
Molecular Weight (calculated)
12501.2 Da
IEP (calculated)
9.263
GRAVY (calculated)
-0.471
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGERSILH FPHLHIPQSG KSKQGKRDVP KGYLAIKVGQ AEEEQQRFIV PVSYFNHPLF IQLLKEAEEV YGFHHKGTIT IPCHVEQFRC VQGKIDKHHT
101: HLHVPCFRA
101: HLHVPCFRA
001: MGSGEKILKS VHSNRPNNVK SNSKHGIKDV PKGCLAIKVG SKEEEKQRFV VPVFYFNHPL FMQLLREAEE EYGFEQKGTI TIPCHVEVFR YVQDMINRER
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M275]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.