Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76596 | Canola | nucleus | 64.71 | 73.95 |
| Bra007639.1-P | Field mustard | cytosol | 61.76 | 70.59 |
| CDY11381 | Canola | cytosol | 61.76 | 70.59 |
| VIT_15s0048g02860.t01 | Wine grape | cytosol | 52.94 | 62.61 |
| AT2G46690.1 | Thale cress | cytosol | 52.94 | 59.5 |
| Solyc01g096340.2.1 | Tomato | cytosol | 44.12 | 55.05 |
| PGSC0003DMT400000365 | Potato | cytosol | 42.65 | 53.21 |
| AT4G00880.1 | Thale cress | cytosol | 46.32 | 51.64 |
| AT5G53590.1 | Thale cress | cytosol | 33.09 | 31.69 |
| AT2G45210.1 | Thale cress | mitochondrion | 33.09 | 27.78 |
| AT3G60690.1 | Thale cress | mitochondrion | 32.35 | 25.88 |
| AT4G22620.1 | Thale cress | mitochondrion | 30.15 | 25.62 |
| AT4G12410.1 | Thale cress | mitochondrion | 29.41 | 25.48 |
Protein Annotations
| MapMan:35.1 | EntrezGene:825363 | ProteinID:AEE80277.1 | ArrayExpress:AT3G61900 | EnsemblPlantsGene:AT3G61900 | RefSeq:AT3G61900 |
| TAIR:AT3G61900 | RefSeq:AT3G61900-TAIR-G | EnsemblPlants:AT3G61900.1 | TAIR:AT3G61900.1 | ProteinID:CAB71897.1 | GO:GO:0003674 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | RefSeq:NP_191749.1 | PFAM:PF02519 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 |
| PO:PO:0025281 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF29 | UniProt:Q9M275 | InterPro:SAUR_fam | UniParc:UPI00000A837F |
Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M275]
Coordinates
chr3:+:22925742..22926379
Molecular Weight (calculated)
15480.4 Da
IEP (calculated)
9.173
GRAVY (calculated)
-0.752
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGEKILKS VHSNRPNNVK SNSKHGIKDV PKGCLAIKVG SKEEEKQRFV VPVFYFNHPL FMQLLREAEE EYGFEQKGTI TIPCHVEVFR YVQDMINRER
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.