Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11381 | Canola | cytosol | 92.44 | 92.44 |
| VIT_15s0048g02860.t01 | Wine grape | cytosol | 63.87 | 66.09 |
| AT3G61900.1 | Thale cress | cytosol | 73.95 | 64.71 |
| CDY48020 | Canola | cytosol | 34.45 | 64.06 |
| CDX80039 | Canola | cytosol | 65.55 | 63.93 |
| CDY41548 | Canola | cytosol | 65.55 | 63.93 |
| Solyc01g096340.2.1 | Tomato | cytosol | 56.3 | 61.47 |
| PGSC0003DMT400000365 | Potato | cytosol | 54.62 | 59.63 |
| CDY07152 | Canola | cytosol | 57.98 | 51.88 |
| CDY47081 | Canola | cytosol | 34.45 | 47.67 |
| CDY53473 | Canola | extracellular | 43.7 | 44.07 |
| CDY28827 | Canola | cytosol | 46.22 | 42.97 |
| CDY51792 | Canola | cytosol | 45.38 | 42.19 |
| CDY65616 | Canola | cytosol | 30.25 | 41.86 |
| CDY20244 | Canola | cytosol | 44.54 | 39.55 |
| CDY14366 | Canola | cytosol | 42.02 | 33.33 |
| CDX98761 | Canola | mitochondrion | 36.13 | 28.29 |
| CDY71452 | Canola | mitochondrion | 36.97 | 27.67 |
| CDX94106 | Canola | mitochondrion | 35.29 | 27.63 |
| CDX79167 | Canola | mitochondrion | 36.13 | 26.88 |
| CDX95640 | Canola | mitochondrion | 36.13 | 26.71 |
| CDX95639 | Canola | mitochondrion | 36.13 | 26.71 |
| CDX83393 | Canola | mitochondrion | 36.13 | 26.71 |
| CDX76364 | Canola | mitochondrion | 35.29 | 26.42 |
| CDY52310 | Canola | mitochondrion | 34.45 | 25.62 |
| CDX86707 | Canola | mitochondrion | 34.45 | 25.62 |
| CDX71789 | Canola | mitochondrion | 36.13 | 25.29 |
| CDY41147 | Canola | mitochondrion | 36.13 | 25.29 |
| CDY48371 | Canola | mitochondrion | 35.29 | 24.71 |
| CDX89069 | Canola | mitochondrion | 35.29 | 24.71 |
| CDX89071 | Canola | mitochondrion | 35.29 | 24.71 |
| CDX90829 | Canola | mitochondrion | 33.61 | 24.24 |
| CDY21268 | Canola | mitochondrion | 33.61 | 24.24 |
| CDX97341 | Canola | mitochondrion | 29.41 | 23.97 |
Protein Annotations
| EnsemblPlants:CDX76596 | EnsemblPlantsGene:GSBRNA2T00127049001 | GO:A0A078CHA4 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF29 | PFAM:PF02519 | ProteinID:CDX76596 | ProteinID:CDX76596.1 |
| SEG:seg | UniParc:UPI0004EEE0F0 | MapMan:35.1 | : | : | : |
Description
BnaC08g31820D
Coordinates
chrLK031808:+:53540..54182
Molecular Weight (calculated)
14046.8 Da
IEP (calculated)
9.517
GRAVY (calculated)
-0.718
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSREKNLKS FHSNRFKNNI KQGIKDVPKG CLAIKVGSRE EEKQRFVVPI FYFNHPLFMQ LLKEAEEEYG FEQKGTITIP CHVEVFRYVQ DKIHREISVN
101: YHGNHHHNNH NHIVGCFRA
101: YHGNHHHNNH NHIVGCFRA
001: MGSGEKILKS VHSNRPNNVK SNSKHGIKDV PKGCLAIKVG SKEEEKQRFV VPVFYFNHPL FMQLLREAEE EYGFEQKGTI TIPCHVEVFR YVQDMINRER
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M275]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.