CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007552.1-P	Field mustard	mitochondrion	95.29	95.29
CDY41147	Canola	mitochondrion	95.29	95.29
CDY48371	Canola	mitochondrion	88.82	88.82
CDX89069	Canola	mitochondrion	88.24	88.24
CDX89071	Canola	mitochondrion	87.65	87.65
AT3G60690.1	Thale cress	mitochondrion	86.47	86.47
CDX83393	Canola	mitochondrion	53.53	56.52
CDX95640	Canola	mitochondrion	53.53	56.52
CDX95639	Canola	mitochondrion	52.94	55.9
KRH75321	Soybean	mitochondrion	52.35	54.94
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.88	54.32
Solyc01g091030.2.1	Tomato	mitochondrion	45.88	49.06
PGSC0003DMT400066911	Potato	mitochondrion	45.88	49.06
VIT_15s0048g00530.t01	Wine grape	mitochondrion	49.41	48.84
CDY65616	Canola	cytosol	24.71	48.84
PGSC0003DMT400003228	Potato	mitochondrion	38.82	47.83
KRH76182	Soybean	mitochondrion	45.29	45.83
KRH65356	Soybean	mitochondrion	45.29	45.29
Solyc10g018340.1.1	Tomato	mitochondrion	36.47	44.93
GSMUA_Achr1P01750_001	Banana	mitochondrion	44.71	43.93
CDY52310	Canola	mitochondrion	40.0	42.5
CDX86707	Canola	mitochondrion	40.0	42.5
CDX76364	Canola	mitochondrion	38.24	40.88
CDY71452	Canola	mitochondrion	38.24	40.88
CDX79167	Canola	mitochondrion	38.24	40.62
CDY21268	Canola	mitochondrion	39.41	40.61
CDX90829	Canola	mitochondrion	38.82	40.0
CDX97341	Canola	mitochondrion	34.12	39.73
TraesCS2A01G386400.1	Wheat	mitochondrion	37.65	38.55
Os04t0537100-01	Rice	mitochondrion	37.65	38.32
TraesCS2D01G383200.1	Wheat	mitochondrion	36.47	38.27
HORVU2Hr1G092070.1	Barley	mitochondrion	37.06	38.18
TraesCS2B01G403800.1	Wheat	mitochondrion	37.06	37.95
CDX94106	Canola	mitochondrion	33.53	37.5
CDX98761	Canola	mitochondrion	33.53	37.5
CDY47081	Canola	cytosol	18.82	37.21
CDX76596	Canola	nucleus	25.29	36.13
CDY11381	Canola	cytosol	25.29	36.13
TraesCS6B01G286100.1	Wheat	mitochondrion	38.24	35.52
Os02t0643800-01	Rice	mitochondrion	39.41	35.26
TraesCS6D01G220700.1	Wheat	mitochondrion	37.65	35.16
Zm00001d025947_P001	Maize	mitochondrion	35.88	34.86
TraesCS6A01G238300.1	Wheat	mitochondrion	37.65	34.59
Zm00001d017397_P001	Maize	mitochondrion	40.0	34.34
EES11187	Sorghum	mitochondrion	35.29	34.29
Zm00001d002826_P001	Maize	mitochondrion	35.29	33.71
CDY41548	Canola	cytosol	23.53	32.79
Zm00001d051302_P001	Maize	mitochondrion	38.24	32.66
CDY07152	Canola	cytosol	25.29	32.33
CDX80039	Canola	cytosol	22.94	31.97
CDY53473	Canola	extracellular	21.76	31.36
CDY48020	Canola	cytosol	11.76	31.25
EES07542	Sorghum	mitochondrion	37.06	30.43
CDY51792	Canola	cytosol	21.76	28.91
CDY28827	Canola	cytosol	21.18	28.12
CDY20244	Canola	cytosol	21.76	27.61
CDY14366	Canola	cytosol	22.35	25.33

Protein Annotations

EnsemblPlants:CDX71789	EnsemblPlantsGene:GSBRNA2T00155504001	GO:A0A078C6K4	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF56	PFAM:PF02519	ProteinID:CDX71789	ProteinID:CDX71789.1
SEG:seg	UniParc:UPI0004EED459	MapMan:35.1	:	:	:

Description

BnaC08g30850D

Coordinates

chrLK031795:-:569320..569832

Molecular Weight (calculated)

19655.2 Da

IEP (calculated)

11.771

GRAVY (calculated)

-0.582

Length

170 amino acids

Sequence
(BLAST)

001: MRKLRGIKIR RPIQRISRWI LRRIRLRRSR YIRLGPNPPV CKPKAITKLI SWGRSLTSHS ARFLGSKISN SGYKPIGKDP IQNKPDPVPK GHSAVYVGKK
101: DGDFHRVLVP IVYFNHPLFG ELLREAEEEF GFCQQGGITI PCPYSDFKRV QTRIESGSGF GKLFWSRRRQ

Best Arabidopsis Sequence Match ( AT3G60690.1 )
(BLAST)

001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ

Arabidopsis Description

AT3g60690/T4C21_100 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.