Factsheet for PGSC0003DMT400066911

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g091030.2.1	Tomato	mitochondrion	96.23	96.23
PGSC0003DMT400003228	Potato	mitochondrion	56.6	65.22
PGSC0003DMT400032631	Potato	cytosol	32.7	56.52
PGSC0003DMT400012211	Potato	mitochondrion	41.51	54.1
GSMUA_Achr5P15270_001	Banana	mitochondrion	27.04	53.09
VIT_15s0048g00530.t01	Wine grape	mitochondrion	56.6	52.33
PGSC0003DMT400012209	Potato	mitochondrion	52.83	51.22
KRH65356	Soybean	mitochondrion	52.83	49.41
KRH75321	Soybean	mitochondrion	50.31	49.38
KRH76182	Soybean	mitochondrion	50.31	47.62
PGSC0003DMT400012210	Potato	mitochondrion	44.03	47.3
AT3G60690.1	Thale cress	mitochondrion	49.06	45.88
CDX71789	Canola	mitochondrion	49.06	45.88
CDY41147	Canola	mitochondrion	49.06	45.88
Bra007552.1-P	Field mustard	mitochondrion	48.43	45.29
AT2G45210.1	Thale cress	mitochondrion	45.91	45.06
CDX89071	Canola	mitochondrion	47.8	44.71
Bra014476.1-P	Field mustard	mitochondrion	47.8	44.71
CDX89069	Canola	mitochondrion	47.8	44.71
CDY48371	Canola	mitochondrion	47.8	44.71
GSMUA_Achr1P01750_001	Banana	mitochondrion	47.17	43.35
CDX95639	Canola	mitochondrion	42.77	42.24
CDX95640	Canola	mitochondrion	42.77	42.24
CDX83393	Canola	mitochondrion	42.77	42.24
Bra000380.1-P	Field mustard	mitochondrion	42.14	41.61
Os04t0537100-01	Rice	mitochondrion	40.88	38.92
PGSC0003DMT400000365	Potato	cytosol	26.42	38.53
TraesCS2A01G386400.1	Wheat	mitochondrion	38.36	36.75
TraesCS2D01G383200.1	Wheat	mitochondrion	37.11	36.42
TraesCS2B01G403800.1	Wheat	mitochondrion	37.74	36.14
PGSC0003DMT400077712	Potato	cytosol	27.67	36.07
HORVU2Hr1G092070.1	Barley	mitochondrion	37.11	35.76
TraesCS6D01G220700.1	Wheat	mitochondrion	40.25	35.16
TraesCS6B01G286100.1	Wheat	mitochondrion	40.25	34.97
Zm00001d025947_P001	Maize	mitochondrion	38.36	34.86
TraesCS6A01G238300.1	Wheat	mitochondrion	40.25	34.59
Os02t0643800-01	Rice	mitochondrion	40.88	34.21
EES11187	Sorghum	mitochondrion	37.11	33.71
Zm00001d002826_P001	Maize	mitochondrion	37.74	33.71
PGSC0003DMT400008363	Potato	cytosol	24.53	33.33
Zm00001d051302_P001	Maize	mitochondrion	40.88	32.66
Zm00001d017397_P001	Maize	mitochondrion	40.25	32.32
EES07542	Sorghum	mitochondrion	39.62	30.43
PGSC0003DMT400008366	Potato	cytosol	21.38	29.82
PGSC0003DMT400008365	Potato	cytosol, nucleus, plastid	21.38	29.82
PGSC0003DMT400008364	Potato	cytosol, nucleus, plastid	22.01	29.17
PGSC0003DMT400077708	Potato	cytosol	20.75	25.58
PGSC0003DMT400060514	Potato	cytosol	14.47	23.0
PGSC0003DMT400059947	Potato	cytosol	13.84	16.18

Protein Annotations

EnsemblPlants:PGSC0003DMT400066911	EnsemblPlantsGene:PGSC0003DMG400026010	EntrezGene:102604181	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF56	PFAM:PF02519	PGSC:PGSC0003DMG400026010	RefSeq:XP_006347888.1
UniParc:UPI0002964ED1	UniProt:M1CGD4	MapMan:35.1	:	:	:

Description

Auxin-induced protein X10A [Source:PGSC_GENE;Acc:PGSC0003DMG400026010]

Coordinates

chr1:+:70355500..70356465

Molecular Weight (calculated)

18567.5 Da

IEP (calculated)

11.233

GRAVY (calculated)

-0.655

Length

159 amino acids

Sequence
(BLAST)

001: MRRFRGFVLK HRITALFRCV HRRRRFPAKY RRLDRHPSWG SNSISKFLSW TRRLKTRAKA ICSKGNYSGS GRGYIHVGQD PIKEESVPKG HLAVYVGRKD
101: GDYKRVLVPV IYINHPLFSE LLREAEEEYG FNHPGGITIP CRISEFERVQ TRIEQGRVG

Best Arabidopsis Sequence Match ( AT3G60690.1 )
(BLAST)

001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ

Arabidopsis Description

AT3g60690/T4C21_100 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.