Factsheet for PGSC0003DMT400003228

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g018340.1.1	Tomato	mitochondrion	86.96	86.96
PGSC0003DMT400066911	Potato	mitochondrion	65.22	56.6
PGSC0003DMT400032631	Potato	cytosol	35.51	53.26
PGSC0003DMT400012211	Potato	mitochondrion	43.48	49.18
VIT_15s0048g00530.t01	Wine grape	mitochondrion	60.14	48.26
GSMUA_Achr5P15270_001	Banana	mitochondrion	28.26	48.15
AT2G45210.1	Thale cress	mitochondrion	50.0	42.59
KRH65356	Soybean	mitochondrion	52.17	42.35
KRH76182	Soybean	mitochondrion	51.45	42.26
KRH75321	Soybean	mitochondrion	48.55	41.36
CDX83393	Canola	mitochondrion	47.1	40.37
CDX95639	Canola	mitochondrion	47.1	40.37
CDX95640	Canola	mitochondrion	47.1	40.37
Bra000380.1-P	Field mustard	mitochondrion	46.38	39.75
CDY41147	Canola	mitochondrion	48.55	39.41
CDX71789	Canola	mitochondrion	47.83	38.82
Bra007552.1-P	Field mustard	mitochondrion	47.83	38.82
PGSC0003DMT400012209	Potato	mitochondrion	45.65	38.41
CDY48371	Canola	mitochondrion	47.1	38.24
CDX89071	Canola	mitochondrion	47.1	38.24
CDX89069	Canola	mitochondrion	47.1	38.24
Bra014476.1-P	Field mustard	mitochondrion	47.1	38.24
AT3G60690.1	Thale cress	mitochondrion	47.1	38.24
PGSC0003DMT400012210	Potato	mitochondrion	40.58	37.84
PGSC0003DMT400000365	Potato	cytosol	28.99	36.7
PGSC0003DMT400077712	Potato	cytosol	29.71	33.61
GSMUA_Achr1P01750_001	Banana	mitochondrion	42.03	33.53
PGSC0003DMT400008363	Potato	cytosol	27.54	32.48
TraesCS2D01G383200.1	Wheat	mitochondrion	36.23	30.86
TraesCS2B01G403800.1	Wheat	mitochondrion	36.96	30.72
PGSC0003DMT400008366	Potato	cytosol	25.36	30.7
TraesCS2A01G386400.1	Wheat	mitochondrion	36.23	30.12
Os04t0537100-01	Rice	mitochondrion	36.23	29.94
HORVU2Hr1G092070.1	Barley	mitochondrion	35.51	29.7
Os02t0643800-01	Rice	mitochondrion	39.86	28.95
PGSC0003DMT400008365	Potato	cytosol, nucleus, plastid	23.19	28.07
TraesCS6D01G220700.1	Wheat	mitochondrion	36.96	28.02
TraesCS6B01G286100.1	Wheat	mitochondrion	36.96	27.87
TraesCS6A01G238300.1	Wheat	mitochondrion	36.96	27.57
Zm00001d002826_P001	Maize	mitochondrion	35.51	27.53
EES11187	Sorghum	mitochondrion	34.78	27.43
Zm00001d017397_P001	Maize	mitochondrion	39.13	27.27
PGSC0003DMT400008364	Potato	cytosol, nucleus, plastid	23.19	26.67
Zm00001d025947_P001	Maize	mitochondrion	33.33	26.29
Zm00001d051302_P001	Maize	mitochondrion	36.96	25.63
EES07542	Sorghum	mitochondrion	38.41	25.6
PGSC0003DMT400077708	Potato	cytosol	21.74	23.26
PGSC0003DMT400060514	Potato	cytosol	15.94	22.0
PGSC0003DMT400059947	Potato	cytosol	15.22	15.44

Protein Annotations

EnsemblPlants:PGSC0003DMT400003228	EnsemblPlantsGene:PGSC0003DMG400001274	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF56	PFAM:PF02519	PGSC:PGSC0003DMG400001274	UniParc:UPI0002957D64	UniProt:M0ZL99
MapMan:35.1	:	:	:	:	:

Description

SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001274]

Coordinates

chr10:-:22421935..22423070

Molecular Weight (calculated)

15745.4 Da

IEP (calculated)

10.608

GRAVY (calculated)

-0.269

Length

138 amino acids

Sequence
(BLAST)

001: MTKLHGFVLK NHVTSLIRAK PLSRFLKWTQ RLKTICSKVS GADSGRGYVQ IGHKEKANVV PKGHMAIYVG QKDGDFKRVL VPVIYFNHPL FSELLREVED
101: EYGFNYPGGI TIPCRISEFE RVQTQIKQGR VARKMLTV

Best Arabidopsis Sequence Match ( AT2G45210.1 )
(BLAST)

001: MRKIIGFRIG RRVSRWIFRK TRIQRSGYNR IHSTQQACML MRPLAKLKSW GQRLKQSFRR RSTRRSAYIP VDHKKADPVP RGHLAIYVGQ KDGDCHRVLV
101: PIVYFNHPLF GELLREAEKE YGFCHEGGIT IPCLYSDFER VKTRIASGSS SRVFPWGRHC RN

Arabidopsis Description

SAUR36Auxin-responsive protein SAUR36 [Source:UniProtKB/Swiss-Prot;Acc:O22150]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.