Factsheet for Bra007552.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41147	Canola	mitochondrion	98.24	98.24
CDX71789	Canola	mitochondrion	95.29	95.29
Bra014476.1-P	Field mustard	mitochondrion	86.47	86.47
AT3G60690.1	Thale cress	mitochondrion	85.88	85.88
Bra000380.1-P	Field mustard	mitochondrion	52.35	55.28
KRH75321	Soybean	mitochondrion	51.76	54.32
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.29	53.09
VIT_15s0048g00530.t01	Wine grape	mitochondrion	49.41	48.84
Solyc01g091030.2.1	Tomato	mitochondrion	45.29	48.43
PGSC0003DMT400066911	Potato	mitochondrion	45.29	48.43
PGSC0003DMT400003228	Potato	mitochondrion	38.82	47.83
KRH76182	Soybean	mitochondrion	45.29	45.83
KRH65356	Soybean	mitochondrion	45.29	45.29
Solyc10g018340.1.1	Tomato	mitochondrion	36.47	44.93
GSMUA_Achr1P01750_001	Banana	mitochondrion	45.29	44.51
Bra029452.1-P	Field mustard	mitochondrion	40.0	42.5
Bra020841.1-P	Field mustard	mitochondrion	38.24	40.88
Bra013630.1-P	Field mustard	mitochondrion	38.24	40.62
Bra000772.1-P	Field mustard	mitochondrion	38.82	40.0
Bra018478.1-P	Field mustard	mitochondrion	34.12	39.73
TraesCS2A01G386400.1	Wheat	mitochondrion	37.65	38.55
Os04t0537100-01	Rice	mitochondrion	37.65	38.32
TraesCS2D01G383200.1	Wheat	mitochondrion	36.47	38.27
HORVU2Hr1G092070.1	Barley	mitochondrion	37.06	38.18
TraesCS2B01G403800.1	Wheat	mitochondrion	37.06	37.95
Bra019369.1-P	Field mustard	mitochondrion	32.94	36.84
Bra007639.1-P	Field mustard	cytosol	25.29	36.13
TraesCS6B01G286100.1	Wheat	mitochondrion	38.24	35.52
Bra039264.1-P	Field mustard	cytosol	24.71	35.29
Os02t0643800-01	Rice	mitochondrion	39.41	35.26
TraesCS6D01G220700.1	Wheat	mitochondrion	37.65	35.16
Zm00001d025947_P001	Maize	mitochondrion	35.88	34.86
Zm00001d017397_P001	Maize	mitochondrion	40.59	34.85
TraesCS6A01G238300.1	Wheat	mitochondrion	37.65	34.59
EES11187	Sorghum	mitochondrion	35.29	34.29
Zm00001d002826_P001	Maize	mitochondrion	35.29	33.71
Bra004515.1-P	Field mustard	cytosol	23.53	32.79
Zm00001d051302_P001	Maize	mitochondrion	38.24	32.66
Bra037405.1-P	Field mustard	cytosol	25.29	31.85
EES07542	Sorghum	mitochondrion	37.06	30.43
Bra022663.1-P	Field mustard	cytosol	21.76	28.91
Bra029934.1-P	Field mustard	mitochondrion	26.47	24.73
Bra003044.1-P	Field mustard	cytosol	21.76	24.67

Protein Annotations

EnsemblPlants:Bra007552.1	EnsemblPlants:Bra007552.1-P	EnsemblPlantsGene:Bra007552	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF56	PFAM:PF02519	SEG:seg	UniParc:UPI00025428C8
UniProt:M4CTK8	MapMan:35.1	:	:	:	:

Description

AT3G60690 (E=1e-072) | auxin-responsive family protein

Coordinates

chrA09:+:29765221..29765733

Molecular Weight (calculated)

19569.0 Da

IEP (calculated)

11.436

GRAVY (calculated)

-0.504

Length

170 amino acids

Sequence
(BLAST)

001: MRKLRGIKIR RPIQRISRWI LQRIRLRRSR YIRLGPTQPV CKPKAITKLI SWGRSLTSHS ARFLGSKISN SGYAPIGKDP IQSKPDPVPK GHSAVYVGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFCQEGGITI PCPYSDFKRV QTRIESGSGF GKLFWCRRRQ

Best Arabidopsis Sequence Match ( AT3G60690.1 )
(BLAST)

001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ

Arabidopsis Description

AT3g60690/T4C21_100 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.