Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14366 | Canola | cytosol | 99.33 | 99.33 |
| CDY20244 | Canola | cytosol | 74.67 | 83.58 |
| Bra022663.1-P | Field mustard | cytosol | 64.0 | 75.0 |
| AT5G53590.1 | Thale cress | cytosol | 66.0 | 69.72 |
| TraesCS1B01G201800.1 | Wheat | cytosol | 30.67 | 42.99 |
| Bra039264.1-P | Field mustard | cytosol | 34.0 | 42.86 |
| Bra004515.1-P | Field mustard | cytosol | 34.0 | 41.8 |
| Bra007639.1-P | Field mustard | cytosol | 32.67 | 41.18 |
| HORVU1Hr1G047390.1 | Barley | cytosol | 32.0 | 40.0 |
| TraesCS1D01G177000.1 | Wheat | cytosol | 32.0 | 39.67 |
| Bra037405.1-P | Field mustard | cytosol | 35.33 | 39.26 |
| Os10t0510500-01 | Rice | cytosol | 32.67 | 39.2 |
| TraesCS1A01G178700.1 | Wheat | mitochondrion | 30.67 | 38.02 |
| Zm00001d013869_P001 | Maize | cytosol | 32.0 | 36.92 |
| EER91385 | Sorghum | cytosol, mitochondrion, plastid | 33.33 | 36.76 |
| Zm00001d032475_P001 | Maize | cytosol | 30.0 | 34.88 |
| HORVU1Hr1G072420.1 | Barley | cytosol | 17.33 | 30.59 |
| Bra019369.1-P | Field mustard | mitochondrion | 24.67 | 24.34 |
| Bra020841.1-P | Field mustard | mitochondrion | 24.67 | 23.27 |
| Bra029452.1-P | Field mustard | mitochondrion | 24.67 | 23.12 |
| Bra013630.1-P | Field mustard | mitochondrion | 24.67 | 23.12 |
| Bra000380.1-P | Field mustard | mitochondrion | 24.67 | 22.98 |
| Bra018478.1-P | Field mustard | mitochondrion | 22.0 | 22.6 |
| Bra000772.1-P | Field mustard | mitochondrion | 24.67 | 22.42 |
| Bra014476.1-P | Field mustard | mitochondrion | 24.67 | 21.76 |
| Bra007552.1-P | Field mustard | mitochondrion | 24.67 | 21.76 |
| Bra029934.1-P | Field mustard | mitochondrion | 15.33 | 12.64 |
Protein Annotations
| EnsemblPlants:Bra003044.1 | EnsemblPlants:Bra003044.1-P | EnsemblPlantsGene:Bra003044 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF29 | PFAM:PF02519 | SEG:seg | UniParc:UPI0002543CC7 |
| UniProt:M4CFR2 | MapMan:35.1 | : | : | : | : |
Description
AT5G53590 (E=1e-037) | auxin-responsive family protein
Coordinates
chrA10:+:5777225..5777835
Molecular Weight (calculated)
17543.9 Da
IEP (calculated)
6.215
GRAVY (calculated)
-0.440
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFEDQEEQK QSQSQMVLKF HFHVPHLHIH HHHNHHHVPK GCVAIMVGHE GDEEGLHRFV VPLMFLSHPL FLSLLKEAEE EYGFKHAGPI TIPCRVDEFK
101: HVQEIIDEET HRRHISDDDD EKQRVIECEC FSSITNEIVR STKFLFVVVG
101: HVQEIIDEET HRRHISDDDD EKQRVIECEC FSSITNEIVR STKFLFVVVG
001: MGFEENQKQS PKQSPNHIKH MVFKFHFHVP HLHILPHHHH HHHHDVPKGC VAIMVGHEDD EEGLHRFVVP LVFLSHPLFL DLLKEAEKEY GFKHDGPITI
101: PCGVDEFKHV QEVIDEETHR RHSHGGHGHN NHNHHNNHLR CF
101: PCGVDEFKHV QEVIDEETHR RHSHGGHGHN NHNHHNNHLR CF
Arabidopsis Description
At5g53590 [Source:UniProtKB/TrEMBL;Acc:Q6NPG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.