Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G201800.1 | Wheat | cytosol | 58.82 | 46.73 |
| HORVU1Hr1G047390.1 | Barley | cytosol | 61.18 | 43.33 |
| TraesCS1A01G178700.1 | Wheat | mitochondrion | 58.82 | 41.32 |
| TraesCS1D01G177000.1 | Wheat | cytosol | 58.82 | 41.32 |
| Zm00001d013869_P001 | Maize | cytosol | 52.94 | 34.62 |
| Zm00001d032475_P001 | Maize | cytosol | 51.76 | 34.11 |
| EER91385 | Sorghum | cytosol, mitochondrion, plastid | 54.12 | 33.82 |
| Os10t0510500-01 | Rice | cytosol | 49.41 | 33.6 |
| CDY47081 | Canola | cytosol | 29.41 | 29.07 |
| CDY53473 | Canola | extracellular | 29.41 | 21.19 |
| CDY51792 | Canola | cytosol | 30.59 | 20.31 |
| CDY28827 | Canola | cytosol | 30.59 | 20.31 |
| Bra022663.1-P | Field mustard | cytosol | 30.59 | 20.31 |
| HORVU7Hr1G091350.1 | Barley | mitochondrion, plastid | 30.59 | 19.85 |
| CDY20244 | Canola | cytosol | 29.41 | 18.66 |
| AT5G53590.1 | Thale cress | cytosol | 29.41 | 17.61 |
| Bra003044.1-P | Field mustard | cytosol | 30.59 | 17.33 |
| CDY14366 | Canola | cytosol | 30.59 | 17.33 |
| HORVU6Hr1G080060.1 | Barley | cytosol | 22.35 | 16.1 |
| HORVU6Hr1G080050.1 | Barley | cytosol | 22.35 | 15.83 |
| HORVU6Hr1G080000.1 | Barley | cytosol | 22.35 | 15.83 |
| HORVU2Hr1G092070.1 | Barley | mitochondrion | 18.82 | 9.7 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G072420.1 | EnsemblPlantsGene:HORVU1Hr1G072420 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF53 | PFAM:PF02519 | UniParc:UPI000B4731F8 | UniProt:A0A287G6M7 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr1H:-:497472764..497473345
Molecular Weight (calculated)
9817.6 Da
IEP (calculated)
8.789
GRAVY (calculated)
-0.913
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: NVKKIQRPKH SSSRALLDEA EREYGFRHQG AIAIPCRVDR FVHVKHLIDR DLGVQGHQLV DLDCGATTRS DLEEKQSRSE VEQRR
001: MGFEENQKQS PKQSPNHIKH MVFKFHFHVP HLHILPHHHH HHHHDVPKGC VAIMVGHEDD EEGLHRFVVP LVFLSHPLFL DLLKEAEKEY GFKHDGPITI
101: PCGVDEFKHV QEVIDEETHR RHSHGGHGHN NHNHHNNHLR CF
101: PCGVDEFKHV QEVIDEETHR RHSHGGHGHN NHNHHNNHLR CF
Arabidopsis Description
At5g53590 [Source:UniProtKB/TrEMBL;Acc:Q6NPG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.