Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G359800.1 | Wheat | cytosol | 90.68 | 91.45 |
| HORVU6Hr1G080000.1 | Barley | cytosol | 90.68 | 89.17 |
| HORVU6Hr1G080050.1 | Barley | cytosol | 88.14 | 86.67 |
| Os02t0769100-01 | Rice | cytosol | 75.42 | 69.53 |
| EES05864 | Sorghum | cytosol | 72.03 | 69.11 |
| Zm00001d052148_P001 | Maize | cytosol | 67.8 | 68.38 |
| Zm00001d018200_P001 | Maize | cytosol, mitochondrion, nucleus | 67.8 | 65.57 |
| GSMUA_Achr7P18840_001 | Banana | cytosol | 53.39 | 64.95 |
| GSMUA_Achr9P15440_001 | Banana | cytosol | 45.76 | 60.67 |
| VIT_07s0031g02740.t01 | Wine grape | cytosol | 49.15 | 59.79 |
| GSMUA_Achr9P15450_001 | Banana | cytosol | 44.07 | 59.77 |
| KRH59646 | Soybean | cytosol | 43.22 | 50.49 |
| KRH63954 | Soybean | cytosol | 45.76 | 50.47 |
| GSMUA_Achr3P20300_001 | Banana | nucleus | 47.46 | 50.45 |
| GSMUA_Achr5P05780_001 | Banana | cytosol | 51.69 | 49.19 |
| PGSC0003DMT400060514 | Potato | cytosol | 41.53 | 49.0 |
| KRH53979 | Soybean | cytosol | 44.07 | 48.6 |
| KRH40994 | Soybean | cytosol | 42.37 | 47.62 |
| Solyc05g056440.1.1 | Tomato | cytosol | 41.53 | 46.67 |
| Solyc05g056430.1.1 | Tomato | cytosol | 39.83 | 45.19 |
| HORVU7Hr1G091350.1 | Barley | mitochondrion, plastid | 38.14 | 34.35 |
| PGSC0003DMT400059947 | Potato | cytosol | 38.98 | 33.82 |
| HORVU1Hr1G047390.1 | Barley | cytosol | 33.9 | 33.33 |
| HORVU1Hr1G072420.1 | Barley | cytosol | 16.1 | 22.35 |
| HORVU2Hr1G092070.1 | Barley | mitochondrion | 22.03 | 15.76 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G080060.1 | EnsemblPlantsGene:HORVU6Hr1G080060 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF18 | PFAM:PF02519 | SEG:seg | UniParc:UPI000296B9B5 | UniProt:M0XUP9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:539891177..539891678
Molecular Weight (calculated)
13210.6 Da
IEP (calculated)
9.803
GRAVY (calculated)
-0.552
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGDQAEKRG KVKKGWLAVR VGQAEQQGDG FRRFVIPIAY LYHPLFQRLL EAARDTYGYD SAGPLRLPCS VDEFLRLRAL VDRETAHSHS SSSHRVHAGA
101: HPEQGYSFSP CARAKITS
101: HPEQGYSFSP CARAKITS
001: MGTGEKTLKS FQLHRKQSVK VKDVPKGCLA IKVGSQGEEQ QRFIVPVLYF NHPLFMQLLK EAEDEYGFDQ KGTITIPCHV EEFRYVQALI DGERSVYNGN
101: NHHHRHGGRD QYHHLVGCFR A
101: NHHHRHGGRD QYHHLVGCFR A
Arabidopsis Description
SAUR32Auxin-responsive protein SAUR32 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.