CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40994	Soybean	cytosol	93.07	89.52
VIT_07s0031g02740.t01	Wine grape	cytosol	74.26	77.32
KRH63954	Soybean	cytosol	76.24	71.96
KRH53979	Soybean	cytosol	76.24	71.96
PGSC0003DMT400060514	Potato	cytosol	68.32	69.0
GSMUA_Achr9P15440_001	Banana	cytosol	58.42	66.29
Solyc05g056440.1.1	Tomato	cytosol	67.33	64.76
GSMUA_Achr9P15450_001	Banana	cytosol	53.47	62.07
GSMUA_Achr7P18840_001	Banana	cytosol	59.41	61.86
Solyc05g056430.1.1	Tomato	cytosol	62.38	60.58
GSMUA_Achr5P05780_001	Banana	cytosol	61.39	50.0
TraesCS6A01G329000.1	Wheat	cytosol	48.51	48.51
GSMUA_Achr3P20300_001	Banana	nucleus	52.48	47.75
TraesCS6B01G359800.1	Wheat	cytosol	52.48	45.3
TraesCS6D01G307900.1	Wheat	cytosol	50.49	44.74
TraesCS6D01G308000.1	Wheat	cytosol	51.49	44.44
TraesCS6A01G329100.1	Wheat	cytosol	51.49	44.44
HORVU6Hr1G080050.1	Barley	cytosol	52.48	44.17
HORVU6Hr1G080000.1	Barley	cytosol	52.48	44.17
TraesCS6A01G328900.1	Wheat	cytosol	53.47	43.9
TraesCS6A01G328600.1	Wheat	cytosol	52.48	43.8
TraesCS6D01G307600.1	Wheat	cytosol	53.47	43.55
TraesCS6B01G359400.1	Wheat	cytosol	51.49	43.33
HORVU6Hr1G080060.1	Barley	cytosol	50.49	43.22
TraesCS6B01G359700.1	Wheat	cytosol	49.51	42.73
TraesCS6B01G359900.1	Wheat	cytosol	50.49	42.5
TraesCS6A01G328700.1	Wheat	cytosol	52.48	42.4
EES05864	Sorghum	cytosol	51.49	42.28
Zm00001d052148_P001	Maize	cytosol	48.51	41.88
PGSC0003DMT400059947	Potato	cytosol	55.45	41.18
TraesCS6D01G307800.1	Wheat	cytosol	50.49	41.13
Zm00001d018200_P001	Maize	cytosol, mitochondrion, nucleus	48.51	40.16
Os02t0769100-01	Rice	cytosol	50.49	39.84
KRH64344	Soybean	cytosol, nucleus	39.6	39.6
KRH68946	Soybean	cytosol	32.67	35.48
KRH47836	Soybean	cytosol	38.61	33.91
KRH06402	Soybean	cytosol	37.62	32.76
TraesCS6B01G359600.1	Wheat	cytosol	46.53	30.32
KRG97226	Soybean	cytosol	33.66	29.57
KRH47837	Soybean	cytosol	35.64	29.51
KRH06403	Soybean	cytosol	34.65	28.46
KRH53592	Soybean	nucleus	36.63	27.21
KRH04072	Soybean	cytosol	27.72	23.33
KRH57344	Soybean	mitochondrion	26.73	22.31
KRH75321	Soybean	mitochondrion	27.72	17.28
KRH76182	Soybean	mitochondrion	25.74	15.48
KRH65356	Soybean	mitochondrion	25.74	15.29

Protein Annotations

EMBL:ACUP02003337	EMBL:BT090710	EnsemblPlants:KRH59646	EnsemblPlantsGene:GLYMA_05G196300	EntrezGene:100306557	GO:GO:0008150
GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF18	PFAM:PF02519
ProteinID:KRH59646	ProteinID:KRH59646.1	SEG:seg	UniParc:UPI0001B151A6	UniProt:C6SZV7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr5:-:38053568..38054664

Molecular Weight (calculated)

11968.3 Da

IEP (calculated)

8.317

GRAVY (calculated)

-0.683

Length

101 amino acids

Sequence
(BLAST)

001: MKVKKGWLAV QVEEEGGGGG SQRFVIPISY LYHPLFKHLL DKAYEVYGYH TEGPLKLPCS VDDFLHLRWR IEKESTTHHH HQHHHHHHHR QLPHALYFHA
101: C

Best Arabidopsis Sequence Match ( AT2G46690.1 )
(BLAST)

001: MGTGEKTLKS FQLHRKQSVK VKDVPKGCLA IKVGSQGEEQ QRFIVPVLYF NHPLFMQLLK EAEDEYGFDQ KGTITIPCHV EEFRYVQALI DGERSVYNGN
101: NHHHRHGGRD QYHHLVGCFR A

Arabidopsis Description

SAUR32Auxin-responsive protein SAUR32 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.