Factsheet for GSMUA_Achr3P20300_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P18840_001	Banana	cytosol	54.95	62.89
GSMUA_Achr9P15440_001	Banana	cytosol	49.55	61.8
GSMUA_Achr9P15450_001	Banana	cytosol	46.85	59.77
VIT_07s0031g02740.t01	Wine grape	cytosol	49.55	56.7
TraesCS6A01G329000.1	Wheat	cytosol	48.65	53.47
KRH59646	Soybean	cytosol	47.75	52.48
KRH63954	Soybean	cytosol	50.45	52.34
KRH53979	Soybean	cytosol	49.55	51.4
GSMUA_Achr5P05780_001	Banana	cytosol	55.86	50.0
PGSC0003DMT400060514	Potato	cytosol	45.05	50.0
TraesCS6B01G359700.1	Wheat	cytosol	52.25	49.57
KRH40994	Soybean	cytosol	46.85	49.52
TraesCS6D01G307900.1	Wheat	cytosol	50.45	49.12
TraesCS6A01G329100.1	Wheat	cytosol	51.35	48.72
Solyc05g056440.1.1	Tomato	cytosol	45.95	48.57
Solyc05g056430.1.1	Tomato	cytosol	45.05	48.08
TraesCS6D01G308000.1	Wheat	cytosol	50.45	47.86
HORVU6Hr1G080050.1	Barley	cytosol	51.35	47.5
HORVU6Hr1G080060.1	Barley	cytosol	50.45	47.46
TraesCS6B01G359800.1	Wheat	cytosol	49.55	47.01
HORVU6Hr1G080000.1	Barley	cytosol	50.45	46.67
TraesCS6B01G359400.1	Wheat	cytosol	50.45	46.67
TraesCS6A01G328900.1	Wheat	cytosol	51.35	46.34
TraesCS6B01G359900.1	Wheat	cytosol	49.55	45.83
TraesCS6A01G328600.1	Wheat	cytosol	49.55	45.45
TraesCS6D01G307600.1	Wheat	cytosol	50.45	45.16
TraesCS6A01G328700.1	Wheat	cytosol	50.45	44.8
Os02t0769100-01	Rice	cytosol	51.35	44.53
TraesCS6D01G307800.1	Wheat	cytosol	49.55	44.35
Zm00001d052148_P001	Maize	cytosol	45.95	43.59
EES05864	Sorghum	cytosol	47.75	43.09
Zm00001d018200_P001	Maize	cytosol, mitochondrion, nucleus	45.05	40.98
PGSC0003DMT400059947	Potato	cytosol	44.14	36.03
TraesCS6B01G359600.1	Wheat	cytosol	48.65	34.84
GSMUA_Achr1P07810_001	Banana	mitochondrion	32.43	29.27
GSMUA_AchrUn_...	Banana	mitochondrion	29.73	28.95
GSMUA_Achr3P12490_001	Banana	cytosol	28.83	26.23
GSMUA_Achr5P15270_001	Banana	mitochondrion	16.22	22.22
GSMUA_Achr1P01750_001	Banana	mitochondrion	25.23	16.18

Protein Annotations

EnsemblPlants:GSMUA_Achr3P20300_001	EnsemblPlants:GSMUA_Achr3T20300_001	EnsemblPlantsGene:GSMUA_Achr3G20300_001	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF18	PFAM:PF02519	SEG:seg	UniParc:UPI000294C23E
UniProt:M0SG96	MapMan:35.2	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G20300_001]

Coordinates

chr3:-:21482199..21482534

Molecular Weight (calculated)

12539.3 Da

IEP (calculated)

8.883

GRAVY (calculated)

-0.134

Length

111 amino acids

Sequence
(BLAST)

001: MQEKEEKKRR KVRKGWLTVT VGTEVEAGGF RRFLIPISYL YHPLFTGLLD SARDTYGFPS SGPLALPCSV DDFLHLRWLI ETETQPSVSA LTGRMRDRLI
101: GCLSLSHGLC L

Best Arabidopsis Sequence Match ( AT5G53590.1 )
(BLAST)

001: MGFEENQKQS PKQSPNHIKH MVFKFHFHVP HLHILPHHHH HHHHDVPKGC VAIMVGHEDD EEGLHRFVVP LVFLSHPLFL DLLKEAEKEY GFKHDGPITI
101: PCGVDEFKHV QEVIDEETHR RHSHGGHGHN NHNHHNNHLR CF

Arabidopsis Description

At5g53590 [Source:UniProtKB/TrEMBL;Acc:Q6NPG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.