Factsheet for VIT_07s0031g02740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
peroxisome 1
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59646	Soybean	cytosol	77.32	74.26
GSMUA_Achr9P15440_001	Banana	cytosol	68.04	74.16
PGSC0003DMT400060514	Potato	cytosol	71.13	69.0
GSMUA_Achr9P15450_001	Banana	cytosol	61.86	68.97
KRH40994	Soybean	cytosol	74.23	68.57
KRH63954	Soybean	cytosol	75.26	68.22
KRH53979	Soybean	cytosol	74.23	67.29
GSMUA_Achr7P18840_001	Banana	cytosol	67.01	67.01
Solyc05g056440.1.1	Tomato	cytosol	71.13	65.71
Solyc05g056430.1.1	Tomato	cytosol	68.04	63.46
GSMUA_Achr5P05780_001	Banana	cytosol	69.07	54.03
TraesCS6A01G329000.1	Wheat	cytosol	54.64	52.48
TraesCS6B01G359800.1	Wheat	cytosol	59.79	49.57
GSMUA_Achr3P20300_001	Banana	nucleus	56.7	49.55
HORVU6Hr1G080060.1	Barley	cytosol	59.79	49.15
TraesCS6D01G307900.1	Wheat	cytosol	57.73	49.12
EES05864	Sorghum	cytosol	60.82	47.97
TraesCS6A01G328600.1	Wheat	cytosol	59.79	47.93
TraesCS6D01G308000.1	Wheat	cytosol	57.73	47.86
TraesCS6A01G329100.1	Wheat	cytosol	57.73	47.86
HORVU6Hr1G080000.1	Barley	cytosol	58.76	47.5
TraesCS6B01G359700.1	Wheat	cytosol	56.7	47.01
Zm00001d052148_P001	Maize	cytosol	56.7	47.01
TraesCS6D01G307600.1	Wheat	cytosol	59.79	46.77
Zm00001d018200_P001	Maize	cytosol, mitochondrion, nucleus	58.76	46.72
TraesCS6B01G359400.1	Wheat	cytosol	57.73	46.67
HORVU6Hr1G080050.1	Barley	cytosol	57.73	46.67
TraesCS6A01G328900.1	Wheat	cytosol	58.76	46.34
Os02t0769100-01	Rice	cytosol	60.82	46.09
TraesCS6B01G359900.1	Wheat	cytosol	56.7	45.83
TraesCS6A01G328700.1	Wheat	cytosol	57.73	44.8
TraesCS6D01G307800.1	Wheat	cytosol	56.7	44.35
PGSC0003DMT400059947	Potato	cytosol	56.7	40.44
VIT_16s0098g01150.t01	Wine grape	cytosol	44.33	35.54
VIT_15s0048g02860.t01	Wine grape	cytosol	41.24	34.78
TraesCS6B01G359600.1	Wheat	cytosol	52.58	32.9
VIT_02s0154g00010.t01	Wine grape	mitochondrion	31.96	19.02
VIT_15s0048g00530.t01	Wine grape	mitochondrion	32.99	18.6

Protein Annotations

EntrezGene:100259386	wikigene:100259386	MapMan:35.2	UniProt:A5B062	EMBL:AM442100	ProteinID:CAN76261
ProteinID:CAN76261.1	ProteinID:CCB47165	ProteinID:CCB47165.1	EMBL:FN595233	GO:GO:0008150	GO:GO:0009719
GO:GO:0009733	EntrezGene:LOC100259386	wikigene:LOC100259386	PFAM:PF02519	PANTHER:PTHR31374	PANTHER:PTHR31374:SF18
InterPro:SAUR_fam	TIGR:TC62262	UniParc:UPI000151FE39	ArrayExpress:VIT_07s0031g02740	EnsemblPlantsGene:VIT_07s0031g02740	EnsemblPlants:VIT_07s0031g02740.t01
unigene:Vvi.2611	RefSeq:XP_002272614	RefSeq:XP_002272614.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:19209927..19210526

Molecular Weight (calculated)

11369.6 Da

IEP (calculated)

7.858

GRAVY (calculated)

-0.476

Length

97 amino acids

Sequence
(BLAST)

1: MKVKKGWLAV EVGLEEEDGG FQRFVIPISY LYHPLFKRLL EKAQEVYGFH TAGPLRLPCS VDDFLHLRWR IERENGSHHN HHHHHHHLSG ALSFHSC

Best Arabidopsis Sequence Match ( AT5G53590.1 )
(BLAST)

001: MGFEENQKQS PKQSPNHIKH MVFKFHFHVP HLHILPHHHH HHHHDVPKGC VAIMVGHEDD EEGLHRFVVP LVFLSHPLFL DLLKEAEKEY GFKHDGPITI
101: PCGVDEFKHV QEVIDEETHR RHSHGGHGHN NHNHHNNHLR CF

Arabidopsis Description

At5g53590 [Source:UniProtKB/TrEMBL;Acc:Q6NPG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.