Factsheet for VIT_02s0154g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65616	Canola	cytosol	29.45	55.81
PGSC0003DMT400032631	Potato	cytosol	31.29	55.43
Solyc08g079150.1.1	Tomato	mitochondrion	53.99	54.32
PGSC0003DMT400012211	Potato	mitochondrion	40.49	54.1
PGSC0003DMT400012209	Potato	mitochondrion	53.37	53.05
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.77	51.85
Solyc08g079140.1.1	Tomato	mitochondrion	45.4	50.0
KRH04072	Soybean	cytosol	36.81	50.0
PGSC0003DMT400012210	Potato	mitochondrion	44.79	49.32
KRH57344	Soybean	mitochondrion	34.97	47.11
Solyc08g079130.1.1	Tomato	mitochondrion	38.65	47.01
VIT_15s0048g00530.t01	Wine grape	mitochondrion	49.08	46.51
CDX76364	Canola	mitochondrion	44.79	45.91
Bra020841.1-P	Field mustard	mitochondrion	44.79	45.91
CDY71452	Canola	mitochondrion	43.56	44.65
CDX86707	Canola	mitochondrion	43.56	44.38
CDX79167	Canola	mitochondrion	43.56	44.38
Bra029452.1-P	Field mustard	mitochondrion	43.56	44.38
CDY52310	Canola	mitochondrion	43.56	44.38
Bra013630.1-P	Field mustard	mitochondrion	43.56	44.38
AT4G22620.1	Thale cress	mitochondrion	42.94	43.75
Bra019369.1-P	Field mustard	mitochondrion	40.49	43.42
CDX98761	Canola	mitochondrion	40.49	43.42
CDX94106	Canola	mitochondrion	40.49	43.42
GSMUA_Achr1P01750_001	Banana	mitochondrion	46.01	43.35
AT4G12410.1	Thale cress	mitochondrion	41.72	43.31
Bra000772.1-P	Field mustard	mitochondrion	41.72	41.21
CDX90829	Canola	mitochondrion	41.72	41.21
CDX97341	Canola	mitochondrion	36.2	40.41
Bra018478.1-P	Field mustard	mitochondrion	36.2	40.41
CDY21268	Canola	mitochondrion	40.49	40.0
TraesCS2A01G386400.1	Wheat	mitochondrion	39.26	38.55
HORVU2Hr1G092070.1	Barley	mitochondrion	38.65	38.18
TraesCS2D01G383200.1	Wheat	mitochondrion	37.42	37.65
VIT_15s0048g02860.t01	Wine grape	cytosol	26.38	37.39
Os04t0537100-01	Rice	mitochondrion	38.04	37.13
TraesCS2B01G403800.1	Wheat	mitochondrion	37.42	36.75
TraesCS6B01G286100.1	Wheat	mitochondrion	39.26	34.97
Zm00001d051302_P001	Maize	mitochondrion	42.33	34.67
TraesCS6D01G220700.1	Wheat	mitochondrion	38.65	34.62
EES11187	Sorghum	mitochondrion	36.81	34.29
TraesCS6A01G238300.1	Wheat	mitochondrion	38.65	34.05
Zm00001d025947_P001	Maize	mitochondrion	36.2	33.71
Os02t0643800-01	Rice	mitochondrion	38.65	33.16
VIT_16s0098g01150.t01	Wine grape	cytosol	24.54	33.06
Zm00001d002826_P001	Maize	mitochondrion	35.58	32.58
Zm00001d017397_P001	Maize	mitochondrion	39.26	32.32
VIT_07s0031g02740.t01	Wine grape	cytosol	19.02	31.96
EES07542	Sorghum	mitochondrion	38.04	29.95
Bra029934.1-P	Field mustard	mitochondrion	30.67	27.47

Protein Annotations

EntrezGene:100255700	wikigene:100255700	MapMan:35.1	ProteinID:CBI31878	ProteinID:CBI31878.3	UniProt:D7TN05
EMBL:FN596001	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	EntrezGene:LOC100255700	wikigene:LOC100255700
PFAM:PF02519	PANTHER:PTHR31374	PANTHER:PTHR31374:SF56	InterPro:SAUR_fam	TIGR:TC65264	UniParc:UPI00015CC921
ArrayExpress:VIT_02s0154g00010	EnsemblPlantsGene:VIT_02s0154g00010	EnsemblPlants:VIT_02s0154g00010.t01	unigene:Vvi.7227	RefSeq:XP_002265485	RefSeq:XP_002265485.1

Description

No Description!

Coordinates

chr2:-:4822437..4823283

Molecular Weight (calculated)

19013.4 Da

IEP (calculated)

11.244

GRAVY (calculated)

-0.585

Length

163 amino acids

Sequence
(BLAST)

001: MRKTKGFRLG RKLVTVFRWV FRRNQSPRVI KSLDHRSCRS RAMTKICNWG RRLLMKAKGL CFPKSGYVRV GHEPCETKPM EVPKGHLAVY VGDSGDHTHR
101: VLVPVLYFNH PLFGELLRNA EKVYGFNHPG GITIPCPITE FEKVKTRIDA GEHFRRYRSK QRH

Best Arabidopsis Sequence Match ( AT3G60690.1 )
(BLAST)

001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ

Arabidopsis Description

AT3g60690/T4C21_100 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.