Factsheet for Solyc08g079150.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012209	Potato	mitochondrion	95.68	94.51
Solyc08g079140.1.1	Tomato	mitochondrion	68.52	75.0
Solyc08g079130.1.1	Tomato	mitochondrion	59.88	72.39
CDY65616	Canola	cytosol	29.01	54.65
VIT_02s0154g00010.t01	Wine grape	mitochondrion	54.32	53.99
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.93	51.85
Solyc01g091030.2.1	Tomato	mitochondrion	49.38	50.31
CDX76364	Canola	mitochondrion	46.3	47.17
CDY71452	Canola	mitochondrion	46.3	47.17
Bra020841.1-P	Field mustard	mitochondrion	46.3	47.17
CDX79167	Canola	mitochondrion	46.3	46.88
Bra013630.1-P	Field mustard	mitochondrion	46.3	46.88
KRH04072	Soybean	cytosol	34.57	46.67
AT4G12410.1	Thale cress	mitochondrion	45.06	46.5
CDX86707	Canola	mitochondrion	45.68	46.25
Bra029452.1-P	Field mustard	mitochondrion	45.68	46.25
CDY52310	Canola	mitochondrion	45.68	46.25
AT4G22620.1	Thale cress	mitochondrion	44.44	45.0
KRH57344	Soybean	mitochondrion	33.33	44.63
Bra019369.1-P	Field mustard	mitochondrion	41.36	44.08
CDX94106	Canola	mitochondrion	41.36	44.08
Solyc10g018340.1.1	Tomato	mitochondrion	37.04	43.48
CDX98761	Canola	mitochondrion	40.74	43.42
Bra000772.1-P	Field mustard	mitochondrion	43.21	42.42
CDX90829	Canola	mitochondrion	43.21	42.42
CDY21268	Canola	mitochondrion	42.59	41.82
GSMUA_Achr1P01750_001	Banana	mitochondrion	44.44	41.62
CDX97341	Canola	mitochondrion	37.04	41.1
Bra018478.1-P	Field mustard	mitochondrion	37.04	41.1
Os04t0537100-01	Rice	mitochondrion	39.51	38.32
TraesCS2A01G386400.1	Wheat	mitochondrion	37.04	36.14
HORVU2Hr1G092070.1	Barley	mitochondrion	36.42	35.76
TraesCS2D01G383200.1	Wheat	mitochondrion	35.19	35.19
TraesCS2B01G403800.1	Wheat	mitochondrion	35.8	34.94
Solyc01g096340.2.1	Tomato	cytosol	23.46	34.86
TraesCS6B01G286100.1	Wheat	mitochondrion	38.89	34.43
TraesCS6D01G220700.1	Wheat	mitochondrion	38.27	34.07
Os02t0643800-01	Rice	mitochondrion	39.51	33.68
Zm00001d051302_P001	Maize	mitochondrion	41.36	33.67
Zm00001d017397_P001	Maize	mitochondrion	40.74	33.33
Zm00001d002826_P001	Maize	mitochondrion	36.42	33.15
Zm00001d025947_P001	Maize	mitochondrion	35.8	33.14
TraesCS6A01G238300.1	Wheat	mitochondrion	37.65	32.97
EES11187	Sorghum	mitochondrion	35.19	32.57
Solyc03g082510.1.1	Tomato	cytosol	22.84	32.46
Solyc06g053290.1.1	Tomato	cytosol, nucleus, peroxisome	22.84	32.17
EES07542	Sorghum	mitochondrion	37.04	28.99
Solyc05g056430.1.1	Tomato	cytosol	18.52	28.85
Solyc03g082530.1.1	Tomato	cytosol, nucleus, plastid	21.6	28.69
Solyc03g082520.1.1	Tomato	cytosol	20.37	28.21
Bra029934.1-P	Field mustard	mitochondrion	30.86	27.47
Solyc05g056440.1.1	Tomato	cytosol	17.28	26.67
Solyc06g053260.1.1	Tomato	cytosol	20.37	25.58

Protein Annotations

EnsemblPlants:Solyc08g079150.1.1	EnsemblPlantsGene:Solyc08g079150.1	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	UniParc:UPI000276B0F1	UniProt:K4CNS4	MapMan:35.1

Description

No Description!

Coordinates

chr8:+:62796300..62796788

Molecular Weight (calculated)

18594.9 Da

IEP (calculated)

10.880

GRAVY (calculated)

-0.410

Length

162 amino acids

Sequence
(BLAST)

001: MKKNRGFRIG RRLVRVFSWL IHRRRNGNKR LSCASRAISK LCKLGVLLKQ RAKGLCFGKP NSGYVRVGQE PIDLKQVSVP KGHLAVYVGE KEDDTCRIVV
101: PVIYFNHPLF AELLREAEMV YEYNYPGRIQ IPCRISEFEN VKSRIAATGG GGGELRWRQS YR

Best Arabidopsis Sequence Match ( AT4G22620.1 )
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.