Factsheet for Bra020841.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76364	Canola	mitochondrion	100.0	100.0
Bra013630.1-P	Field mustard	mitochondrion	89.31	88.75
AT4G22620.1	Thale cress	mitochondrion	86.16	85.62
Bra019369.1-P	Field mustard	mitochondrion	80.5	84.21
Bra029452.1-P	Field mustard	mitochondrion	76.1	75.62
Bra000772.1-P	Field mustard	mitochondrion	72.96	70.3
Bra018478.1-P	Field mustard	mitochondrion	61.64	67.12
Bra029934.1-P	Field mustard	mitochondrion	62.26	54.4
PGSC0003DMT400012211	Potato	mitochondrion	40.25	52.46
PGSC0003DMT400032631	Potato	cytosol	29.56	51.09
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.16	49.38
KRH04072	Soybean	cytosol	36.48	48.33
Solyc08g079130.1.1	Tomato	mitochondrion	40.25	47.76
KRH57344	Soybean	mitochondrion	35.85	47.11
Solyc08g079150.1.1	Tomato	mitochondrion	47.17	46.3
PGSC0003DMT400012209	Potato	mitochondrion	47.17	45.73
VIT_02s0154g00010.t01	Wine grape	mitochondrion	45.91	44.79
Solyc08g079140.1.1	Tomato	mitochondrion	40.88	43.92
PGSC0003DMT400012210	Potato	mitochondrion	39.62	42.57
Bra014476.1-P	Field mustard	mitochondrion	42.77	40.0
Bra000380.1-P	Field mustard	mitochondrion	40.25	39.75
Bra007552.1-P	Field mustard	mitochondrion	40.88	38.24
GSMUA_Achr1P01750_001	Banana	mitochondrion	40.88	37.57
Bra007639.1-P	Field mustard	cytosol	27.67	36.97
Bra039264.1-P	Field mustard	cytosol	27.04	36.13
Os04t0537100-01	Rice	mitochondrion	37.11	35.33
TraesCS2A01G386400.1	Wheat	mitochondrion	35.85	34.34
HORVU2Hr1G092070.1	Barley	mitochondrion	35.22	33.94
TraesCS2B01G403800.1	Wheat	mitochondrion	35.22	33.73
TraesCS2D01G383200.1	Wheat	mitochondrion	33.96	33.33
TraesCS6B01G286100.1	Wheat	mitochondrion	37.11	32.24
TraesCS6D01G220700.1	Wheat	mitochondrion	36.48	31.87
Bra037405.1-P	Field mustard	cytosol	27.04	31.85
TraesCS6A01G238300.1	Wheat	mitochondrion	36.48	31.35
Bra004515.1-P	Field mustard	cytosol	23.9	31.15
Os02t0643800-01	Rice	mitochondrion	37.11	31.05
EES11187	Sorghum	mitochondrion	33.96	30.86
Zm00001d002826_P001	Maize	mitochondrion	33.96	30.34
Zm00001d025947_P001	Maize	mitochondrion	33.33	30.29
Zm00001d051302_P001	Maize	mitochondrion	37.11	29.65
Zm00001d017397_P001	Maize	mitochondrion	35.85	28.79
Bra022663.1-P	Field mustard	cytosol	22.64	28.12
EES07542	Sorghum	mitochondrion	36.48	28.02
Bra003044.1-P	Field mustard	cytosol	23.27	24.67

Protein Annotations

EnsemblPlants:Bra020841.1	EnsemblPlants:Bra020841.1-P	EnsemblPlantsGene:Bra020841	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	UniParc:UPI0002545E12	UniProt:M4DWE7
MapMan:35.1	:	:	:	:	:

Description

AT4G22620 (E=5e-078) | auxin-responsive family protein

Coordinates

chrA08:+:11753295..11753774

Molecular Weight (calculated)

18377.9 Da

IEP (calculated)

11.341

GRAVY (calculated)

-0.413

Length

159 amino acids

Sequence
(BLAST)

001: MKRLRGFKIG HRLVKIFKWI IRTRRIQTGK RQCLTGLLNP VPKIYSLARC LRRGANTLCG GKKTGQTRLG NEPKPQAVPK GHLVVHVGEC GDDTRRVVVP
101: VVYFNHPLFG ELLEEKERVY GFDQPGRITI PCRVSDFEKV QMRIAAWDHC RRKRAFKIF

Best Arabidopsis Sequence Match ( AT4G22620.1 )
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.