Factsheet for PGSC0003DMT400012209

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079150.1.1	Tomato	mitochondrion	94.51	95.68
PGSC0003DMT400012210	Potato	mitochondrion	72.56	80.41
PGSC0003DMT400012211	Potato	mitochondrion	59.76	80.33
PGSC0003DMT400032631	Potato	cytosol	40.24	71.74
CDY65616	Canola	cytosol	29.88	56.98
VIT_02s0154g00010.t01	Wine grape	mitochondrion	53.05	53.37
GSMUA_Achr5P15270_001	Banana	mitochondrion	26.22	53.09
PGSC0003DMT400066911	Potato	mitochondrion	51.22	52.83
Bra029452.1-P	Field mustard	mitochondrion	46.95	48.12
CDX86707	Canola	mitochondrion	46.95	48.12
CDY52310	Canola	mitochondrion	46.95	48.12
AT4G12410.1	Thale cress	mitochondrion	45.73	47.77
CDY71452	Canola	mitochondrion	45.73	47.17
Bra020841.1-P	Field mustard	mitochondrion	45.73	47.17
CDX76364	Canola	mitochondrion	45.73	47.17
Bra013630.1-P	Field mustard	mitochondrion	45.73	46.88
CDX79167	Canola	mitochondrion	45.73	46.88
KRH04072	Soybean	cytosol	33.54	45.83
PGSC0003DMT400003228	Potato	mitochondrion	38.41	45.65
AT4G22620.1	Thale cress	mitochondrion	43.9	45.0
CDX94106	Canola	mitochondrion	40.85	44.08
Bra019369.1-P	Field mustard	mitochondrion	40.85	44.08
KRH57344	Soybean	mitochondrion	32.32	43.8
Bra000772.1-P	Field mustard	mitochondrion	43.9	43.64
CDX90829	Canola	mitochondrion	43.9	43.64
CDX98761	Canola	mitochondrion	40.24	43.42
CDY21268	Canola	mitochondrion	43.29	43.03
CDX97341	Canola	mitochondrion	37.8	42.47
Bra018478.1-P	Field mustard	mitochondrion	37.8	42.47
GSMUA_Achr1P01750_001	Banana	mitochondrion	43.9	41.62
Os04t0537100-01	Rice	mitochondrion	39.63	38.92
TraesCS2A01G386400.1	Wheat	mitochondrion	36.59	36.14
HORVU2Hr1G092070.1	Barley	mitochondrion	35.98	35.76
TraesCS2D01G383200.1	Wheat	mitochondrion	34.76	35.19
TraesCS6B01G286100.1	Wheat	mitochondrion	39.02	34.97
TraesCS2B01G403800.1	Wheat	mitochondrion	35.37	34.94
TraesCS6D01G220700.1	Wheat	mitochondrion	38.41	34.62
Os02t0643800-01	Rice	mitochondrion	39.63	34.21
Zm00001d051302_P001	Maize	mitochondrion	41.46	34.17
PGSC0003DMT400000365	Potato	cytosol	22.56	33.95
Zm00001d017397_P001	Maize	mitochondrion	40.85	33.84
Zm00001d025947_P001	Maize	mitochondrion	35.98	33.71
Zm00001d002826_P001	Maize	mitochondrion	36.59	33.71
TraesCS6A01G238300.1	Wheat	mitochondrion	37.8	33.51
EES11187	Sorghum	mitochondrion	35.37	33.14
PGSC0003DMT400077712	Potato	cytosol	24.39	32.79
PGSC0003DMT400008363	Potato	cytosol	23.17	32.48
PGSC0003DMT400008365	Potato	cytosol, nucleus, plastid	21.34	30.7
PGSC0003DMT400008364	Potato	cytosol, nucleus, plastid	21.95	30.0
PGSC0003DMT400008366	Potato	cytosol	20.73	29.82
EES07542	Sorghum	mitochondrion	37.2	29.47
PGSC0003DMT400060514	Potato	cytosol	17.68	29.0
Bra029934.1-P	Field mustard	mitochondrion	29.88	26.92
PGSC0003DMT400077708	Potato	cytosol	19.51	24.81
PGSC0003DMT400059947	Potato	cytosol	16.46	19.85

Protein Annotations

EnsemblPlants:PGSC0003DMT400012209	EnsemblPlantsGene:PGSC0003DMG400004785	EntrezGene:102583229	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	PGSC:PGSC0003DMG400004785	RefSeq:XP_006355495.1
UniParc:UPI000295E62C	UniProt:M1A0W4	MapMan:35.1	:	:	:

Description

Auxin-induced protein X10A [Source:PGSC_GENE;Acc:PGSC0003DMG400004785]

Coordinates

chr8:+:52781657..52782622

Molecular Weight (calculated)

18670.0 Da

IEP (calculated)

10.982

GRAVY (calculated)

-0.366

Length

164 amino acids

Sequence
(BLAST)

001: MKKHRGFRIG RRLVRVFSWL IHRRRNGRIG NKRLSCASRA ISKLCKLGVL LKQRAKGLCS AKPNSGYIRV GQEPIDLKQV SVPKGHLAVY VGEKDDDTCR
101: IVVPVIYFNH PLFAELLREA EMVYGYNYPG RIQIPCRISE FENVKSRIAA TGGGGGELRW RQSY

Best Arabidopsis Sequence Match ( AT4G22620.1 )
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.