Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008364 | Potato | cytosol, nucleus, plastid | 94.74 | 90.0 |
| Solyc03g082520.1.1 | Tomato | cytosol | 84.21 | 82.05 |
| PGSC0003DMT400008363 | Potato | cytosol | 63.16 | 61.54 |
| PGSC0003DMT400008366 | Potato | cytosol | 60.53 | 60.53 |
| KRH64344 | Soybean | cytosol, nucleus | 50.88 | 57.43 |
| PGSC0003DMT400077712 | Potato | cytosol | 61.4 | 57.38 |
| VIT_16s0098g01150.t01 | Wine grape | cytosol | 60.53 | 57.02 |
| PGSC0003DMT400077708 | Potato | cytosol | 64.04 | 56.59 |
| PGSC0003DMT400000365 | Potato | cytosol | 50.88 | 53.21 |
| KRH53592 | Soybean | nucleus | 57.89 | 48.53 |
| PGSC0003DMT400032631 | Potato | cytosol | 28.07 | 34.78 |
| PGSC0003DMT400060514 | Potato | cytosol | 28.07 | 32.0 |
| PGSC0003DMT400012211 | Potato | mitochondrion | 31.58 | 29.51 |
| PGSC0003DMT400003228 | Potato | mitochondrion | 28.07 | 23.19 |
| PGSC0003DMT400012210 | Potato | mitochondrion | 29.82 | 22.97 |
| PGSC0003DMT400066911 | Potato | mitochondrion | 29.82 | 21.38 |
| PGSC0003DMT400012209 | Potato | mitochondrion | 30.7 | 21.34 |
| PGSC0003DMT400059947 | Potato | cytosol | 25.44 | 21.32 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400008365 | EnsemblPlantsGene:PGSC0003DMG400003227 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF15 | PFAM:PF02519 | PGSC:PGSC0003DMG400003227 | SEG:seg | UniParc:UPI0002963CFD |
| UniProt:M0ZUG7 | MapMan:35.1 | : | : | : | : |
Description
SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003227]
Coordinates
chr3:-:47726829..47727516
Molecular Weight (calculated)
13392.0 Da
IEP (calculated)
7.164
GRAVY (calculated)
-0.540
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGNKHHHL NFHVQFHFPF HHTKEELRDT VPRGCVTVLV GQGEEEQQKF VIPVMHINHP LFTQLLKEAE QVYGFHHNGP LNIPCNIDQF RYVEGMIDKD
101: VHHHHHHHLC CFKA
101: VHHHHHHHLC CFKA
001: MGNGDKVMSH WSFHIPRLHH HEHDHEKVPK GCLAVKVGQG EEQERFVIPV MYFNHPLFGQ LLKEAEEEFG FAQKGTITIP CHVEEFRYVQ GLIDRENTRF
101: LGTNLLDHHH HHHNHLIRCF RV
101: LGTNLLDHHH HHHNHLIRCF RV
Arabidopsis Description
AT4g00880 protein [Source:UniProtKB/TrEMBL;Acc:O23089]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.