Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008365 | Potato | cytosol, nucleus, plastid | 90.0 | 94.74 |
| Solyc03g082520.1.1 | Tomato | cytosol | 82.5 | 84.62 |
| PGSC0003DMT400008366 | Potato | cytosol | 60.83 | 64.04 |
| PGSC0003DMT400008363 | Potato | cytosol | 59.17 | 60.68 |
| PGSC0003DMT400077712 | Potato | cytosol | 60.0 | 59.02 |
| KRH64344 | Soybean | cytosol, nucleus | 49.17 | 58.42 |
| PGSC0003DMT400077708 | Potato | cytosol | 62.5 | 58.14 |
| VIT_16s0098g01150.t01 | Wine grape | cytosol | 57.5 | 57.02 |
| PGSC0003DMT400000365 | Potato | cytosol | 45.83 | 50.46 |
| KRH53592 | Soybean | nucleus | 55.83 | 49.26 |
| PGSC0003DMT400032631 | Potato | cytosol | 27.5 | 35.87 |
| PGSC0003DMT400060514 | Potato | cytosol | 27.5 | 33.0 |
| PGSC0003DMT400012211 | Potato | mitochondrion | 30.83 | 30.33 |
| PGSC0003DMT400012210 | Potato | mitochondrion | 29.17 | 23.65 |
| PGSC0003DMT400003228 | Potato | mitochondrion | 26.67 | 23.19 |
| PGSC0003DMT400066911 | Potato | mitochondrion | 29.17 | 22.01 |
| PGSC0003DMT400012209 | Potato | mitochondrion | 30.0 | 21.95 |
| PGSC0003DMT400059947 | Potato | cytosol | 24.17 | 21.32 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400008364 | EnsemblPlantsGene:PGSC0003DMG400003226 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF15 | PFAM:PF02519 | PGSC:PGSC0003DMG400003226 | SEG:seg | UniParc:UPI000296225A |
| UniProt:M0ZUG6 | MapMan:35.1 | : | : | : | : |
Description
SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003226]
Coordinates
chr3:-:47708800..47709835
Molecular Weight (calculated)
14240.9 Da
IEP (calculated)
7.084
GRAVY (calculated)
-0.632
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGNKHHHN HHLNFHVQFY FPFHLHHHTK EELRDTVPRG CVTVLVGQGD EEQQKFVIPV MHINHPLFTQ LLKEAEQVYG FHHNGPLNIP CNIDEFRYVE
101: GMIDKDVHHN HHHHLWCFKA
101: GMIDKDVHHN HHHHLWCFKA
001: MGSGEKILKS VHSNRPNNVK SNSKHGIKDV PKGCLAIKVG SKEEEKQRFV VPVFYFNHPL FMQLLREAEE EYGFEQKGTI TIPCHVEVFR YVQDMINRER
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M275]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.