Factsheet for PGSC0003DMT400012210

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079140.1.1	Tomato	mitochondrion	90.54	90.54
PGSC0003DMT400012211	Potato	mitochondrion	62.84	76.23
PGSC0003DMT400032631	Potato	cytosol	45.95	73.91
PGSC0003DMT400012209	Potato	mitochondrion	80.41	72.56
CDY65616	Canola	cytosol	30.41	52.33
KRH04072	Soybean	cytosol	38.51	47.5
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.0	45.68
KRH57344	Soybean	mitochondrion	37.16	45.45
VIT_02s0154g00010.t01	Wine grape	mitochondrion	49.32	44.79
PGSC0003DMT400066911	Potato	mitochondrion	47.3	44.03
CDY71452	Canola	mitochondrion	44.59	41.51
CDX79167	Canola	mitochondrion	43.92	40.62
Bra013630.1-P	Field mustard	mitochondrion	43.92	40.62
PGSC0003DMT400003228	Potato	mitochondrion	37.84	40.58
CDX86707	Canola	mitochondrion	43.24	40.0
Bra029452.1-P	Field mustard	mitochondrion	43.24	40.0
CDY52310	Canola	mitochondrion	43.24	40.0
CDX76364	Canola	mitochondrion	42.57	39.62
Bra020841.1-P	Field mustard	mitochondrion	42.57	39.62
AT4G12410.1	Thale cress	mitochondrion	41.89	39.49
CDX98761	Canola	mitochondrion	40.54	39.47
CDX94106	Canola	mitochondrion	39.86	38.82
Bra019369.1-P	Field mustard	mitochondrion	39.86	38.82
AT4G22620.1	Thale cress	mitochondrion	41.22	38.12
PGSC0003DMT400000365	Potato	cytosol	27.03	36.7
GSMUA_Achr1P01750_001	Banana	mitochondrion	42.57	36.42
Bra000772.1-P	Field mustard	mitochondrion	40.54	36.36
CDX90829	Canola	mitochondrion	40.54	36.36
CDY21268	Canola	mitochondrion	40.54	36.36
Bra018478.1-P	Field mustard	mitochondrion	35.81	36.3
CDX97341	Canola	mitochondrion	35.81	36.3
Os04t0537100-01	Rice	mitochondrion	37.84	33.53
TraesCS2A01G386400.1	Wheat	mitochondrion	35.14	31.33
HORVU2Hr1G092070.1	Barley	mitochondrion	34.46	30.91
PGSC0003DMT400008363	Potato	cytosol	24.32	30.77
PGSC0003DMT400008366	Potato	cytosol	23.65	30.7
TraesCS2D01G383200.1	Wheat	mitochondrion	33.11	30.25
TraesCS2B01G403800.1	Wheat	mitochondrion	33.78	30.12
PGSC0003DMT400008365	Potato	cytosol, nucleus, plastid	22.97	29.82
PGSC0003DMT400077712	Potato	cytosol	24.32	29.51
Zm00001d017397_P001	Maize	mitochondrion	39.19	29.29
PGSC0003DMT400008364	Potato	cytosol, nucleus, plastid	23.65	29.17
Zm00001d025947_P001	Maize	mitochondrion	34.46	29.14
PGSC0003DMT400060514	Potato	cytosol	19.59	29.0
Zm00001d051302_P001	Maize	mitochondrion	38.51	28.64
TraesCS6D01G220700.1	Wheat	mitochondrion	35.14	28.57
EES11187	Sorghum	mitochondrion	33.78	28.57
Os02t0643800-01	Rice	mitochondrion	36.49	28.42
TraesCS6B01G286100.1	Wheat	mitochondrion	35.14	28.42
TraesCS6A01G238300.1	Wheat	mitochondrion	35.14	28.11
Zm00001d002826_P001	Maize	mitochondrion	33.78	28.09
PGSC0003DMT400077708	Potato	cytosol	21.62	24.81
EES07542	Sorghum	mitochondrion	34.46	24.64
Bra029934.1-P	Field mustard	mitochondrion	29.05	23.63
PGSC0003DMT400059947	Potato	cytosol	18.24	19.85

Protein Annotations

EnsemblPlants:PGSC0003DMT400012210	EnsemblPlantsGene:PGSC0003DMG400004786	EntrezGene:102582894	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	PGSC:PGSC0003DMG400004786	RefSeq:XP_006355494.1
SEG:seg	UniParc:UPI000296B5D7	UniProt:M1A0W5	MapMan:35.1	:	:

Description

Auxin-induced protein X10A [Source:PGSC_GENE;Acc:PGSC0003DMG400004786]

Coordinates

chr8:+:52770044..52770759

Molecular Weight (calculated)

16737.7 Da

IEP (calculated)

11.055

GRAVY (calculated)

-0.353

Length

148 amino acids

Sequence
(BLAST)

001: MKKLLVRVLL HRRRKGRFFS RAISNLCKLG HFLKQSTKGL CFGRPNSGYI RVGQEPIAPK KVSVPKGHLA VYVGEKKDDT CRIMVPVIYF NHPLFAELLK
101: EAEMVYGYNH SGGIRIPCRV SEFENVKSRI AATGGGGSSR GELRWRHK

Best Arabidopsis Sequence Match ( AT3G60690.1 )
(BLAST)

001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ

Arabidopsis Description

AT3g60690/T4C21_100 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.