Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g053260.1.1 | Tomato | cytosol | 96.12 | 96.12 |
| PGSC0003DMT400077712 | Potato | cytosol | 61.24 | 64.75 |
| PGSC0003DMT400008363 | Potato | cytosol | 58.14 | 64.1 |
| PGSC0003DMT400008365 | Potato | cytosol, nucleus, plastid | 56.59 | 64.04 |
| PGSC0003DMT400008364 | Potato | cytosol, nucleus, plastid | 58.14 | 62.5 |
| PGSC0003DMT400008366 | Potato | cytosol | 52.71 | 59.65 |
| VIT_16s0098g01150.t01 | Wine grape | cytosol | 54.26 | 57.85 |
| KRH64344 | Soybean | cytosol, nucleus | 42.64 | 54.46 |
| PGSC0003DMT400000365 | Potato | cytosol | 41.86 | 49.54 |
| KRH53592 | Soybean | nucleus | 51.16 | 48.53 |
| PGSC0003DMT400032631 | Potato | cytosol | 24.81 | 34.78 |
| PGSC0003DMT400060514 | Potato | cytosol | 20.93 | 27.0 |
| PGSC0003DMT400012211 | Potato | mitochondrion | 24.81 | 26.23 |
| PGSC0003DMT400003228 | Potato | mitochondrion | 23.26 | 21.74 |
| PGSC0003DMT400012210 | Potato | mitochondrion | 24.81 | 21.62 |
| PGSC0003DMT400066911 | Potato | mitochondrion | 25.58 | 20.75 |
| PGSC0003DMT400012209 | Potato | mitochondrion | 24.81 | 19.51 |
| PGSC0003DMT400059947 | Potato | cytosol | 20.16 | 19.12 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400077708 | EnsemblPlantsGene:PGSC0003DMG400030231 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF15 | PFAM:PF02519 | PGSC:PGSC0003DMG400030231 | SEG:seg | UniParc:UPI0002952A66 |
| UniProt:M1CYT2 | MapMan:35.1 | : | : | : | : |
Description
SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030231]
Coordinates
chr6:+:38901000..38901773
Molecular Weight (calculated)
15040.9 Da
IEP (calculated)
6.987
GRAVY (calculated)
-0.691
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGDHKHHH HHLNLHVQVH LPHIHFHHHH HHQHGHGIKE MIGIPKGCLP VLVGHDGEEQ HKFIIPVIYI NHPLFTQLLK GNEEECELHH DGPMNIPCHI
101: EEFRYVEGMI DKETHATGHH NHHAWCYKA
101: EEFRYVEGMI DKETHATGHH NHHAWCYKA
001: MGTGEKTLKS FQLHRKQSVK VKDVPKGCLA IKVGSQGEEQ QRFIVPVLYF NHPLFMQLLK EAEDEYGFDQ KGTITIPCHV EEFRYVQALI DGERSVYNGN
101: NHHHRHGGRD QYHHLVGCFR A
101: NHHHRHGGRD QYHHLVGCFR A
Arabidopsis Description
SAUR32Auxin-responsive protein SAUR32 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.