Factsheet for Bra029934.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019369.1-P	Field mustard	mitochondrion	62.09	74.34
CDX98761	Canola	mitochondrion	60.99	73.03
CDX94106	Canola	mitochondrion	60.44	72.37
Bra013630.1-P	Field mustard	mitochondrion	55.49	63.12
Bra020841.1-P	Field mustard	mitochondrion	54.4	62.26
AT4G22620.1	Thale cress	mitochondrion	53.3	60.62
Bra029452.1-P	Field mustard	mitochondrion	46.7	53.12
Bra018478.1-P	Field mustard	mitochondrion	41.76	52.05
Bra000772.1-P	Field mustard	mitochondrion	45.05	49.7
PGSC0003DMT400032631	Potato	cytosol	17.03	33.7
PGSC0003DMT400012211	Potato	mitochondrion	22.53	33.61
KRH04072	Soybean	cytosol	20.88	31.67
Solyc08g079130.1.1	Tomato	mitochondrion	23.08	31.34
Solyc08g079150.1.1	Tomato	mitochondrion	27.47	30.86
VIT_02s0154g00010.t01	Wine grape	mitochondrion	27.47	30.67
KRH57344	Soybean	mitochondrion	20.33	30.58
PGSC0003DMT400012209	Potato	mitochondrion	26.92	29.88
Solyc08g079140.1.1	Tomato	mitochondrion	24.18	29.73
PGSC0003DMT400012210	Potato	mitochondrion	23.63	29.05
Bra014476.1-P	Field mustard	mitochondrion	24.73	26.47
Bra007552.1-P	Field mustard	mitochondrion	24.73	26.47
Bra000380.1-P	Field mustard	mitochondrion	23.08	26.09
Bra007639.1-P	Field mustard	cytosol	17.03	26.05
Bra039264.1-P	Field mustard	cytosol	16.48	25.21
GSMUA_Achr1P01750_001	Banana	mitochondrion	23.08	24.28
TraesCS2A01G386400.1	Wheat	mitochondrion	21.43	23.49
TraesCS2B01G403800.1	Wheat	mitochondrion	21.43	23.49
GSMUA_Achr5P15270_001	Banana	mitochondrion	10.44	23.46
HORVU2Hr1G092070.1	Barley	mitochondrion	20.88	23.03
Os04t0537100-01	Rice	mitochondrion	20.88	22.75
TraesCS6B01G286100.1	Wheat	mitochondrion	22.53	22.4
Bra037405.1-P	Field mustard	cytosol	16.48	22.22
TraesCS6D01G220700.1	Wheat	mitochondrion	21.98	21.98
TraesCS6A01G238300.1	Wheat	mitochondrion	21.98	21.62
TraesCS2D01G383200.1	Wheat	mitochondrion	19.23	21.6
Bra004515.1-P	Field mustard	cytosol	14.29	21.31
Os02t0643800-01	Rice	mitochondrion	21.98	21.05
Zm00001d017397_P001	Maize	mitochondrion	21.43	19.7
Zm00001d002826_P001	Maize	mitochondrion	19.23	19.66
EES11187	Sorghum	mitochondrion	18.68	19.43
Zm00001d025947_P001	Maize	mitochondrion	18.68	19.43
EES07542	Sorghum	mitochondrion	21.98	19.32
Zm00001d051302_P001	Maize	mitochondrion	20.88	19.1
Bra022663.1-P	Field mustard	cytosol	13.19	18.75
Bra003044.1-P	Field mustard	cytosol	12.64	15.33

Protein Annotations

EnsemblPlants:Bra029934.1	EnsemblPlants:Bra029934.1-P	EnsemblPlantsGene:Bra029934	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	SEG:seg	UniParc:UPI000254414C
UniProt:M4EMB4	MapMan:35.2	:	:	:	:

Description

AT4G22620 (E=1e-043) | auxin-responsive family protein

Coordinates

chrA01:+:15025892..15027508

Molecular Weight (calculated)

21174.0 Da

IEP (calculated)

11.690

GRAVY (calculated)

-0.409

Length

182 amino acids

Sequence
(BLAST)

001: MKRLQGFKIF KWIIRSRRIQ TGKRQCLTGI LNPVSRICYL ARCLRRGASR LCGGKKTVQT RLGNDPESLG VPKGHLVVHV GESGDDTRRV VVPVFYFNHP
101: LFGELTVSLL HIYFRQAPRK DNDADSIWSH FCRNGSVFLQ HHSKVRRAPL SRRPRRLMIT DEQIPQKHRN LNFICFRDVN MI

Best Arabidopsis Sequence Match ( AT4G22620.1 )
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.