Factsheet for Bra000380.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95640	Canola	mitochondrion	97.52	97.52
CDX83393	Canola	mitochondrion	97.52	97.52
CDX95639	Canola	mitochondrion	96.89	96.89
AT2G45210.1	Thale cress	mitochondrion	68.94	68.52
GSMUA_Achr5P15270_001	Banana	mitochondrion	27.33	54.32
Bra014476.1-P	Field mustard	mitochondrion	55.9	52.94
Bra007552.1-P	Field mustard	mitochondrion	55.28	52.35
VIT_15s0048g00530.t01	Wine grape	mitochondrion	50.93	47.67
PGSC0003DMT400003228	Potato	mitochondrion	39.75	46.38
KRH75321	Soybean	mitochondrion	46.58	46.3
KRH76182	Soybean	mitochondrion	46.58	44.64
Solyc10g018340.1.1	Tomato	mitochondrion	37.89	44.2
KRH65356	Soybean	mitochondrion	46.58	44.12
Solyc01g091030.2.1	Tomato	mitochondrion	42.24	42.77
PGSC0003DMT400066911	Potato	mitochondrion	41.61	42.14
GSMUA_Achr1P01750_001	Banana	mitochondrion	44.72	41.62
Bra020841.1-P	Field mustard	mitochondrion	39.75	40.25
Bra013630.1-P	Field mustard	mitochondrion	37.89	38.12
Bra007639.1-P	Field mustard	cytosol	27.95	37.82
HORVU2Hr1G092070.1	Barley	mitochondrion	38.51	37.58
TraesCS2D01G383200.1	Wheat	mitochondrion	37.27	37.04
Bra018478.1-P	Field mustard	mitochondrion	33.54	36.99
Bra000772.1-P	Field mustard	mitochondrion	37.89	36.97
Bra029452.1-P	Field mustard	mitochondrion	36.65	36.88
Bra019369.1-P	Field mustard	mitochondrion	34.78	36.84
TraesCS2A01G386400.1	Wheat	mitochondrion	37.89	36.75
TraesCS2B01G403800.1	Wheat	mitochondrion	37.89	36.75
Os04t0537100-01	Rice	mitochondrion	37.89	36.53
TraesCS6B01G286100.1	Wheat	mitochondrion	39.75	34.97
TraesCS6D01G220700.1	Wheat	mitochondrion	39.13	34.62
Bra039264.1-P	Field mustard	cytosol	25.47	34.45
Zm00001d017397_P001	Maize	mitochondrion	42.24	34.34
Os02t0643800-01	Rice	mitochondrion	40.37	34.21
TraesCS6A01G238300.1	Wheat	mitochondrion	39.13	34.05
Zm00001d051302_P001	Maize	mitochondrion	40.99	33.17
Bra037405.1-P	Field mustard	cytosol	27.33	32.59
Zm00001d025947_P001	Maize	mitochondrion	35.4	32.57
Zm00001d002826_P001	Maize	mitochondrion	35.4	32.02
EES11187	Sorghum	mitochondrion	34.78	32.0
Bra004515.1-P	Field mustard	cytosol	24.22	31.97
EES07542	Sorghum	mitochondrion	39.75	30.92
Bra022663.1-P	Field mustard	cytosol	22.36	28.12
Bra003044.1-P	Field mustard	cytosol	22.98	24.67
Bra029934.1-P	Field mustard	mitochondrion	26.09	23.08

Protein Annotations

EnsemblPlants:Bra000380.1	EnsemblPlants:Bra000380.1-P	EnsemblPlantsGene:Bra000380	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	GO:GO:0009791
GO:GO:0010029	GO:GO:1900057	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF56	PFAM:PF02519
UniParc:UPI000253FE3B	UniProt:M4C852	MapMan:35.1	:	:	:

Description

AT2G45210 (E=4e-057) | auxin-responsive protein-related

Coordinates

chrA03:+:10839184..10839669

Molecular Weight (calculated)

18871.1 Da

IEP (calculated)

11.538

GRAVY (calculated)

-0.495

Length

161 amino acids

Sequence
(BLAST)

001: MRKLVGFIMG RRVRRVSRWI LGKTRIRQSG YNRLHPTRPT RMITLPITKL KNWSQRLTQR FSILGSTRRS ECKPDPVPRG HLAVYVGQEE GDFRRVLVPI
101: VYFNHPLFGE LLRESEKEYG FRHEGGITIP CLYSDFQRVK TRIASGLDSD RIFPWSHLCS S

Best Arabidopsis Sequence Match ( AT2G45210.1 )
(BLAST)

001: MRKIIGFRIG RRVSRWIFRK TRIQRSGYNR IHSTQQACML MRPLAKLKSW GQRLKQSFRR RSTRRSAYIP VDHKKADPVP RGHLAIYVGQ KDGDCHRVLV
101: PIVYFNHPLF GELLREAEKE YGFCHEGGIT IPCLYSDFER VKTRIASGSS SRVFPWGRHC RN

Arabidopsis Description

SAUR36Auxin-responsive protein SAUR36 [Source:UniProtKB/Swiss-Prot;Acc:O22150]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.