Factsheet for VIT_15s0048g00530.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
peroxisome 1
nucleus 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003228	Potato	mitochondrion	48.26	60.14
Solyc01g091030.2.1	Tomato	mitochondrion	52.91	57.23
GSMUA_Achr5P15270_001	Banana	mitochondrion	26.74	56.79
PGSC0003DMT400066911	Potato	mitochondrion	52.33	56.6
Solyc10g018340.1.1	Tomato	mitochondrion	45.35	56.52
AT2G45210.1	Thale cress	mitochondrion	51.16	54.32
KRH76182	Soybean	mitochondrion	52.91	54.17
KRH65356	Soybean	mitochondrion	53.49	54.12
CDX83393	Canola	mitochondrion	48.84	52.17
CDX95639	Canola	mitochondrion	48.84	52.17
CDX95640	Canola	mitochondrion	48.84	52.17
KRH75321	Soybean	mitochondrion	48.84	51.85
Bra000380.1-P	Field mustard	mitochondrion	47.67	50.93
CDX71789	Canola	mitochondrion	48.84	49.41
Bra007552.1-P	Field mustard	mitochondrion	48.84	49.41
VIT_02s0154g00010.t01	Wine grape	mitochondrion	46.51	49.08
CDY41147	Canola	mitochondrion	48.26	48.82
CDY48371	Canola	mitochondrion	48.26	48.82
AT3G60690.1	Thale cress	mitochondrion	47.67	48.24
CDX89071	Canola	mitochondrion	47.67	48.24
CDX89069	Canola	mitochondrion	47.67	48.24
Bra014476.1-P	Field mustard	mitochondrion	47.67	48.24
GSMUA_Achr1P01750_001	Banana	mitochondrion	47.67	47.4
VIT_15s0048g02860.t01	Wine grape	cytosol	27.91	41.74
VIT_16s0098g01150.t01	Wine grape	cytosol	27.91	39.67
TraesCS2A01G386400.1	Wheat	mitochondrion	37.21	38.55
TraesCS2B01G403800.1	Wheat	mitochondrion	37.21	38.55
TraesCS2D01G383200.1	Wheat	mitochondrion	36.05	38.27
HORVU2Hr1G092070.1	Barley	mitochondrion	36.63	38.18
Os04t0537100-01	Rice	mitochondrion	36.05	37.13
TraesCS6B01G286100.1	Wheat	mitochondrion	38.37	36.07
Os02t0643800-01	Rice	mitochondrion	39.53	35.79
TraesCS6D01G220700.1	Wheat	mitochondrion	37.79	35.71
Zm00001d025947_P001	Maize	mitochondrion	36.05	35.43
TraesCS6A01G238300.1	Wheat	mitochondrion	37.79	35.14
EES11187	Sorghum	mitochondrion	35.47	34.86
Zm00001d017397_P001	Maize	mitochondrion	38.95	33.84
Zm00001d002826_P001	Maize	mitochondrion	34.88	33.71
Zm00001d051302_P001	Maize	mitochondrion	38.95	33.67
VIT_07s0031g02740.t01	Wine grape	cytosol	18.6	32.99
EES07542	Sorghum	mitochondrion	38.37	31.88

Protein Annotations

ArrayExpress:VIT_15s0048g00530	EMBL:FN596739	EnsemblPlants:VIT_15s0048g00530.t01	EnsemblPlantsGene:VIT_15s0048g00530	EntrezGene:100260776	EntrezGene:LOC100260776
GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF56
PFAM:PF02519	ProteinID:CCB61405	ProteinID:CCB61405.1	RefSeq:XP_002280387	RefSeq:XP_002280387.1	unigene:Vvi.10606
UniParc:UPI00015CA3A3	UniProt:F6I388	wikigene:100260776	wikigene:LOC100260776	MapMan:35.1	:

Description

No Description!

Coordinates

chr15:-:14642837..14643801

Molecular Weight (calculated)

19616.9 Da

IEP (calculated)

10.491

GRAVY (calculated)

-0.469

Length

172 amino acids

Sequence
(BLAST)

001: MRKIRGFKLG KRVVKFCGWF FRRSRNPSGY HRLGQSTGKT KTISRLCNWG QRLKTKAKRI CSLNPGPACF SGYLPVGEEM PAATVPKGHL AVYVGQKDGD
101: FQRVLVPVIY FNHPLFGELL RESEEEYGFQ HPGGITIPCR ISEFESVQTR IAACQGCRKM TWRRHYSAGC HY

Best Arabidopsis Sequence Match ( AT2G45210.1 )
(BLAST)

001: MRKIIGFRIG RRVSRWIFRK TRIQRSGYNR IHSTQQACML MRPLAKLKSW GQRLKQSFRR RSTRRSAYIP VDHKKADPVP RGHLAIYVGQ KDGDCHRVLV
101: PIVYFNHPLF GELLREAEKE YGFCHEGGIT IPCLYSDFER VKTRIASGSS SRVFPWGRHC RN

Arabidopsis Description

SAUR36Auxin-responsive protein SAUR36 [Source:UniProtKB/Swiss-Prot;Acc:O22150]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.