Factsheet for Bra014476.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89069	Canola	mitochondrion	100.0	100.0
CDX89071	Canola	mitochondrion	99.41	99.41
CDY48371	Canola	mitochondrion	97.06	97.06
Bra007552.1-P	Field mustard	mitochondrion	86.47	86.47
AT3G60690.1	Thale cress	mitochondrion	85.29	85.29
Bra000380.1-P	Field mustard	mitochondrion	52.94	55.9
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.88	54.32
KRH75321	Soybean	mitochondrion	48.82	51.23
Solyc01g091030.2.1	Tomato	mitochondrion	44.71	47.8
PGSC0003DMT400066911	Potato	mitochondrion	44.71	47.8
VIT_15s0048g00530.t01	Wine grape	mitochondrion	48.24	47.67
PGSC0003DMT400003228	Potato	mitochondrion	38.24	47.1
Bra029452.1-P	Field mustard	mitochondrion	42.94	45.62
Solyc10g018340.1.1	Tomato	mitochondrion	35.88	44.2
Bra000772.1-P	Field mustard	mitochondrion	41.76	43.03
KRH76182	Soybean	mitochondrion	42.35	42.86
GSMUA_Achr1P01750_001	Banana	mitochondrion	43.53	42.77
Bra020841.1-P	Field mustard	mitochondrion	40.0	42.77
Bra013630.1-P	Field mustard	mitochondrion	40.0	42.5
KRH65356	Soybean	mitochondrion	42.35	42.35
Bra018478.1-P	Field mustard	mitochondrion	35.88	41.78
TraesCS2A01G386400.1	Wheat	mitochondrion	38.24	39.16
Os04t0537100-01	Rice	mitochondrion	38.24	38.92
TraesCS2D01G383200.1	Wheat	mitochondrion	37.06	38.89
HORVU2Hr1G092070.1	Barley	mitochondrion	37.65	38.79
TraesCS2B01G403800.1	Wheat	mitochondrion	37.65	38.55
Bra019369.1-P	Field mustard	mitochondrion	32.94	36.84
TraesCS6B01G286100.1	Wheat	mitochondrion	39.41	36.61
TraesCS6D01G220700.1	Wheat	mitochondrion	38.82	36.26
TraesCS6A01G238300.1	Wheat	mitochondrion	38.82	35.68
Bra007639.1-P	Field mustard	cytosol	24.71	35.29
Os02t0643800-01	Rice	mitochondrion	39.41	35.26
EES11187	Sorghum	mitochondrion	35.88	34.86
Zm00001d025947_P001	Maize	mitochondrion	35.88	34.86
Zm00001d017397_P001	Maize	mitochondrion	40.0	34.34
Zm00001d002826_P001	Maize	mitochondrion	35.88	34.27
Bra039264.1-P	Field mustard	cytosol	22.94	32.77
Zm00001d051302_P001	Maize	mitochondrion	38.24	32.66
Bra037405.1-P	Field mustard	cytosol	24.71	31.11
EES07542	Sorghum	mitochondrion	37.65	30.92
Bra004515.1-P	Field mustard	cytosol	21.76	30.33
Bra022663.1-P	Field mustard	cytosol	22.35	29.69
Bra029934.1-P	Field mustard	mitochondrion	26.47	24.73
Bra003044.1-P	Field mustard	cytosol	21.76	24.67

Protein Annotations

EnsemblPlants:Bra014476.1	EnsemblPlants:Bra014476.1-P	EnsemblPlantsGene:Bra014476	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF56	PFAM:PF02519	UniParc:UPI0000F35DBB	UniProt:M4DDA8
MapMan:35.1	:	:	:	:	:

Description

AT3G60690 (E=7e-086) | auxin-responsive family protein

Coordinates

chrA04:-:872244..872756

Molecular Weight (calculated)

19753.3 Da

IEP (calculated)

11.547

GRAVY (calculated)

-0.596

Length

170 amino acids

Sequence
(BLAST)

001: MRRLRGIKIR RPFQRITRWI LRKTRLRRSR YIRLSPNRPV CKPKAIAKLI SWGRSLSSHS ARFLGCKPSK SGYIPIGKEP VQTKPDPVPK GHSAVYVGKK
101: DGDFHRVLVP IVYFNHPLFG ELLREAEEEF GFCQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRRQ

Best Arabidopsis Sequence Match ( AT3G60690.1 )
(BLAST)

001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ

Arabidopsis Description

AT3g60690/T4C21_100 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.