Factsheet for Bra000772.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90829	Canola	mitochondrion	100.0	100.0
Bra029452.1-P	Field mustard	mitochondrion	84.85	87.5
AT4G12410.1	Thale cress	mitochondrion	80.61	84.71
Bra018478.1-P	Field mustard	mitochondrion	72.12	81.51
Bra013630.1-P	Field mustard	mitochondrion	72.73	75.0
Bra019369.1-P	Field mustard	mitochondrion	69.09	75.0
Bra020841.1-P	Field mustard	mitochondrion	70.3	72.96
PGSC0003DMT400032631	Potato	cytosol	28.48	51.09
PGSC0003DMT400012211	Potato	mitochondrion	35.76	48.36
Solyc08g079130.1.1	Tomato	mitochondrion	38.18	47.01
GSMUA_Achr5P15270_001	Banana	mitochondrion	23.03	46.91
KRH04072	Soybean	cytosol	33.33	45.83
Bra029934.1-P	Field mustard	mitochondrion	49.7	45.05
KRH57344	Soybean	mitochondrion	32.73	44.63
PGSC0003DMT400012209	Potato	mitochondrion	43.64	43.9
Solyc08g079150.1.1	Tomato	mitochondrion	42.42	43.21
Bra014476.1-P	Field mustard	mitochondrion	43.03	41.76
VIT_02s0154g00010.t01	Wine grape	mitochondrion	41.21	41.72
Solyc08g079140.1.1	Tomato	mitochondrion	36.97	41.22
PGSC0003DMT400012210	Potato	mitochondrion	36.36	40.54
GSMUA_Achr1P01750_001	Banana	mitochondrion	41.21	39.31
Bra007552.1-P	Field mustard	mitochondrion	40.0	38.82
Bra000380.1-P	Field mustard	mitochondrion	36.97	37.89
Bra039264.1-P	Field mustard	cytosol	25.45	35.29
Bra007639.1-P	Field mustard	cytosol	25.45	35.29
Os04t0537100-01	Rice	mitochondrion	34.55	34.13
TraesCS2A01G386400.1	Wheat	mitochondrion	33.33	33.13
HORVU2Hr1G092070.1	Barley	mitochondrion	32.73	32.73
TraesCS6B01G286100.1	Wheat	mitochondrion	35.76	32.24
TraesCS2B01G403800.1	Wheat	mitochondrion	32.12	31.93
TraesCS6D01G220700.1	Wheat	mitochondrion	35.15	31.87
TraesCS2D01G383200.1	Wheat	mitochondrion	30.91	31.48
TraesCS6A01G238300.1	Wheat	mitochondrion	35.15	31.35
Os02t0643800-01	Rice	mitochondrion	35.15	30.53
Bra037405.1-P	Field mustard	cytosol	24.85	30.37
Bra004515.1-P	Field mustard	cytosol	22.42	30.33
EES11187	Sorghum	mitochondrion	32.12	30.29
Zm00001d017397_P001	Maize	mitochondrion	34.55	28.79
Zm00001d002826_P001	Maize	mitochondrion	30.91	28.65
Zm00001d025947_P001	Maize	mitochondrion	30.3	28.57
EES07542	Sorghum	mitochondrion	35.76	28.5
Bra022663.1-P	Field mustard	cytosol	21.82	28.12
Zm00001d051302_P001	Maize	mitochondrion	32.12	26.63
Bra003044.1-P	Field mustard	cytosol	22.42	24.67

Protein Annotations

EnsemblPlants:Bra000772.1	EnsemblPlants:Bra000772.1-P	EnsemblPlantsGene:Bra000772	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	UniParc:UPI000253FCF6	UniProt:M4C993
MapMan:35.1	:	:	:	:	:

Description

AT4G12410 (E=2e-072) | auxin-responsive family protein

Coordinates

chrA03:-:12967350..12967847

Molecular Weight (calculated)

18885.3 Da

IEP (calculated)

11.885

GRAVY (calculated)

-0.521

Length

165 amino acids

Sequence
(BLAST)

001: MKRVRGFKIG HRFVKIFRWI RSKRTQTMKR QCPTRITNPI AGIRSLARSL SGRAKRLCGG KKNSGQSQIR LGKDPRTSAS IKVVPKGHLV VHVGESDGDT
101: RRVVVPVIYF NHPLFGELLE QAERVHGFDQ PGQITIPCRV SDFEKVQMRI AAWDHCRRKS NYKIL

Best Arabidopsis Sequence Match ( AT4G12410.1 )
(BLAST)

001: MKRVRGFKIG HRFVKIFKWI PRNRCPTRIT NPVTGIRSLA RCLSRGAKRL CGGSKKNPGQ NQIRLGKDPK KSNRVVPRGH LVVHVGESDD DTRRVVVPVI
101: YFNHPLFGEL LEQAERVHGF DQPGRITIPC RVSDFEKVQL RIAAWDHCRR KNSYKII

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9STH0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.