Factsheet for Bra018478.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97341	Canola	mitochondrion	100.0	100.0
Bra000772.1-P	Field mustard	mitochondrion	81.51	72.12
Bra029452.1-P	Field mustard	mitochondrion	78.08	71.25
AT4G12410.1	Thale cress	mitochondrion	76.03	70.7
Bra013630.1-P	Field mustard	mitochondrion	69.86	63.75
Bra019369.1-P	Field mustard	mitochondrion	65.75	63.16
Bra020841.1-P	Field mustard	mitochondrion	67.12	61.64
KRH04072	Soybean	cytosol	34.93	42.5
Bra029934.1-P	Field mustard	mitochondrion	52.05	41.76
KRH57344	Soybean	mitochondrion	34.25	41.32
PGSC0003DMT400012211	Potato	mitochondrion	34.25	40.98
PGSC0003DMT400032631	Potato	cytosol	25.34	40.22
GSMUA_Achr5P15270_001	Banana	mitochondrion	21.23	38.27
Solyc08g079130.1.1	Tomato	mitochondrion	34.93	38.06
PGSC0003DMT400012209	Potato	mitochondrion	42.47	37.8
Solyc08g079150.1.1	Tomato	mitochondrion	41.1	37.04
VIT_02s0154g00010.t01	Wine grape	mitochondrion	40.41	36.2
Bra014476.1-P	Field mustard	mitochondrion	41.78	35.88
Solyc08g079140.1.1	Tomato	mitochondrion	36.3	35.81
PGSC0003DMT400012210	Potato	mitochondrion	36.3	35.81
Bra007552.1-P	Field mustard	mitochondrion	39.73	34.12
Bra000380.1-P	Field mustard	mitochondrion	36.99	33.54
GSMUA_Achr1P01750_001	Banana	mitochondrion	38.36	32.37
Bra007639.1-P	Field mustard	cytosol	24.66	30.25
Bra039264.1-P	Field mustard	cytosol	24.66	30.25
TraesCS2A01G386400.1	Wheat	mitochondrion	33.56	29.52
Os04t0537100-01	Rice	mitochondrion	33.56	29.34
TraesCS2B01G403800.1	Wheat	mitochondrion	32.88	28.92
HORVU2Hr1G092070.1	Barley	mitochondrion	32.19	28.48
TraesCS2D01G383200.1	Wheat	mitochondrion	31.51	28.4
TraesCS6B01G286100.1	Wheat	mitochondrion	34.93	27.87
TraesCS6D01G220700.1	Wheat	mitochondrion	34.25	27.47
TraesCS6A01G238300.1	Wheat	mitochondrion	34.25	27.03
EES11187	Sorghum	mitochondrion	32.19	26.86
Os02t0643800-01	Rice	mitochondrion	34.93	26.84
Bra037405.1-P	Field mustard	cytosol	24.66	26.67
Zm00001d017397_P001	Maize	mitochondrion	35.62	26.26
Bra004515.1-P	Field mustard	cytosol	21.92	26.23
Zm00001d002826_P001	Maize	mitochondrion	31.51	25.84
Bra022663.1-P	Field mustard	cytosol	22.6	25.78
Zm00001d025947_P001	Maize	mitochondrion	30.82	25.71
Zm00001d051302_P001	Maize	mitochondrion	34.93	25.63
EES07542	Sorghum	mitochondrion	36.3	25.6
Bra003044.1-P	Field mustard	cytosol	22.6	22.0

Protein Annotations

EnsemblPlants:Bra018478.1	EnsemblPlants:Bra018478.1-P	EnsemblPlantsGene:Bra018478	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	UniParc:UPI000254802C	UniProt:M4DPN7
MapMan:35.1	:	:	:	:	:

Description

AT4G12410 (E=4e-056) | auxin-responsive family protein

Coordinates

chrA05:-:8439101..8439541

Molecular Weight (calculated)

16603.4 Da

IEP (calculated)

11.211

GRAVY (calculated)

-0.370

Length

146 amino acids

Sequence
(BLAST)

001: MERVIGFKIG HRFVKIFKWT RCRRTQTNKR QCRTRITNPI TGIRSLARCL SRGAKRLCGG EKISGNSKIR LGKDPNASLS MNVVPKRHLV VHVGESDGDT
101: RRVVVPLIYF NHPLFGELLE QAELVDGFDQ PGRITITCRV SDFEKV

Best Arabidopsis Sequence Match ( AT4G12410.1 )
(BLAST)

001: MKRVRGFKIG HRFVKIFKWI PRNRCPTRIT NPVTGIRSLA RCLSRGAKRL CGGSKKNPGQ NQIRLGKDPK KSNRVVPRGH LVVHVGESDD DTRRVVVPVI
101: YFNHPLFGEL LEQAERVHGF DQPGRITIPC RVSDFEKVQL RIAAWDHCRR KNSYKII

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9STH0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.