Factsheet for Solyc08g079140.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012210	Potato	mitochondrion	90.54	90.54
Solyc08g079150.1.1	Tomato	mitochondrion	75.0	68.52
Solyc08g079130.1.1	Tomato	mitochondrion	59.46	65.67
CDY65616	Canola	cytosol	31.76	54.65
KRH04072	Soybean	cytosol	38.51	47.5
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.0	45.68
KRH57344	Soybean	mitochondrion	37.16	45.45
VIT_02s0154g00010.t01	Wine grape	mitochondrion	50.0	45.4
Solyc01g091030.2.1	Tomato	mitochondrion	46.62	43.4
CDY71452	Canola	mitochondrion	45.95	42.77
CDX79167	Canola	mitochondrion	45.27	41.88
Bra013630.1-P	Field mustard	mitochondrion	45.27	41.88
CDX76364	Canola	mitochondrion	43.92	40.88
Bra020841.1-P	Field mustard	mitochondrion	43.92	40.88
CDX98761	Canola	mitochondrion	41.89	40.79
CDX86707	Canola	mitochondrion	43.92	40.62
Bra029452.1-P	Field mustard	mitochondrion	43.92	40.62
CDY52310	Canola	mitochondrion	43.92	40.62
CDX94106	Canola	mitochondrion	41.22	40.13
Bra019369.1-P	Field mustard	mitochondrion	41.22	40.13
AT4G22620.1	Thale cress	mitochondrion	43.24	40.0
Solyc10g018340.1.1	Tomato	mitochondrion	37.16	39.86
AT4G12410.1	Thale cress	mitochondrion	41.89	39.49
Solyc01g096340.2.1	Tomato	cytosol	27.7	37.61
Bra000772.1-P	Field mustard	mitochondrion	41.22	36.97
CDY21268	Canola	mitochondrion	41.22	36.97
CDX90829	Canola	mitochondrion	41.22	36.97
GSMUA_Achr1P01750_001	Banana	mitochondrion	42.57	36.42
CDX97341	Canola	mitochondrion	35.81	36.3
Bra018478.1-P	Field mustard	mitochondrion	35.81	36.3
Os04t0537100-01	Rice	mitochondrion	37.84	33.53
Solyc06g053290.1.1	Tomato	cytosol, nucleus, peroxisome	25.68	33.04
Solyc03g082510.1.1	Tomato	cytosol	24.32	31.58
TraesCS2A01G386400.1	Wheat	mitochondrion	35.14	31.33
HORVU2Hr1G092070.1	Barley	mitochondrion	34.46	30.91
TraesCS2D01G383200.1	Wheat	mitochondrion	33.11	30.25
TraesCS2B01G403800.1	Wheat	mitochondrion	33.78	30.12
Zm00001d017397_P001	Maize	mitochondrion	39.86	29.8
Zm00001d025947_P001	Maize	mitochondrion	34.46	29.14
TraesCS6D01G220700.1	Wheat	mitochondrion	35.81	29.12
TraesCS6B01G286100.1	Wheat	mitochondrion	35.81	28.96
Os02t0643800-01	Rice	mitochondrion	37.16	28.95
TraesCS6A01G238300.1	Wheat	mitochondrion	35.81	28.65
Zm00001d051302_P001	Maize	mitochondrion	38.51	28.64
EES11187	Sorghum	mitochondrion	33.78	28.57
Zm00001d002826_P001	Maize	mitochondrion	33.78	28.09
Solyc03g082530.1.1	Tomato	cytosol, nucleus, plastid	22.97	27.87
Solyc05g056430.1.1	Tomato	cytosol	18.92	26.92
Solyc05g056440.1.1	Tomato	cytosol	18.92	26.67
Solyc06g053260.1.1	Tomato	cytosol	22.97	26.36
Solyc03g082520.1.1	Tomato	cytosol	20.27	25.64
EES07542	Sorghum	mitochondrion	35.14	25.12
Bra029934.1-P	Field mustard	mitochondrion	29.73	24.18

Protein Annotations

EnsemblPlants:Solyc08g079140.1.1	EnsemblPlantsGene:Solyc08g079140.1	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	SEG:seg	UniParc:UPI000276B0F0	UniProt:K4CNS3
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:62789431..62789877

Molecular Weight (calculated)

16643.5 Da

IEP (calculated)

10.912

GRAVY (calculated)

-0.345

Length

148 amino acids

Sequence
(BLAST)

001: MKKLLVRVLL HRRRKGRIFS RAISNLCKLG HFLKQSTNRL CFGRPNAGYI RVGQEPIASK QVSVPKGHLA VYVGEKKDDT CRVMVPVIYF NHPLFAELLK
101: EAEMVYGYNH SGGIQIPCRV SEFENVKSRI AAMGGGGNSR GERSWKGK

Best Arabidopsis Sequence Match ( AT3G60690.1 )
(BLAST)

001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ

Arabidopsis Description

AT3g60690/T4C21_100 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.