CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013630.1-P	Field mustard	mitochondrion	100.0	100.0
CDY71452	Canola	mitochondrion	98.12	98.74
AT4G22620.1	Thale cress	mitochondrion	89.38	89.38
CDX76364	Canola	mitochondrion	88.75	89.31
CDX94106	Canola	mitochondrion	82.5	86.84
CDX98761	Canola	mitochondrion	81.25	85.53
CDY65616	Canola	cytosol	43.75	81.4
CDY52310	Canola	mitochondrion	78.75	78.75
CDX86707	Canola	mitochondrion	78.12	78.12
CDY21268	Canola	mitochondrion	75.62	73.33
CDX90829	Canola	mitochondrion	75.0	72.73
CDX97341	Canola	mitochondrion	63.75	69.86
PGSC0003DMT400032631	Potato	cytosol	30.62	53.26
PGSC0003DMT400012211	Potato	mitochondrion	39.38	51.64
Solyc08g079130.1.1	Tomato	mitochondrion	40.62	48.51
KRH04072	Soybean	cytosol	35.62	47.5
Solyc08g079150.1.1	Tomato	mitochondrion	46.88	46.3
KRH57344	Soybean	mitochondrion	35.0	46.28
PGSC0003DMT400012209	Potato	mitochondrion	46.88	45.73
GSMUA_Achr5P15270_001	Banana	mitochondrion	23.12	45.68
Solyc08g079140.1.1	Tomato	mitochondrion	41.88	45.27
PGSC0003DMT400012210	Potato	mitochondrion	40.62	43.92
VIT_02s0154g00010.t01	Wine grape	mitochondrion	44.38	43.56
CDY48371	Canola	mitochondrion	42.5	40.0
CDX89069	Canola	mitochondrion	42.5	40.0
CDX89071	Canola	mitochondrion	42.5	40.0
CDY41147	Canola	mitochondrion	41.25	38.82
CDX71789	Canola	mitochondrion	40.62	38.24
CDX83393	Canola	mitochondrion	38.12	37.89
CDX95640	Canola	mitochondrion	38.12	37.89
CDY11381	Canola	cytosol	28.12	37.82
CDX95639	Canola	mitochondrion	37.5	37.27
GSMUA_Achr1P01750_001	Banana	mitochondrion	40.0	36.99
CDX76596	Canola	nucleus	26.88	36.13
CDY47081	Canola	cytosol	18.75	34.88
Os04t0537100-01	Rice	mitochondrion	35.0	33.53
TraesCS2A01G386400.1	Wheat	mitochondrion	34.38	33.13
HORVU2Hr1G092070.1	Barley	mitochondrion	33.75	32.73
TraesCS2B01G403800.1	Wheat	mitochondrion	33.75	32.53
CDY07152	Canola	cytosol	26.88	32.33
CDY41548	Canola	cytosol	24.38	31.97
TraesCS6B01G286100.1	Wheat	mitochondrion	36.25	31.69
TraesCS2D01G383200.1	Wheat	mitochondrion	31.88	31.48
TraesCS6D01G220700.1	Wheat	mitochondrion	35.62	31.32
CDX80039	Canola	cytosol	23.75	31.15
TraesCS6A01G238300.1	Wheat	mitochondrion	35.62	30.81
CDY53473	Canola	extracellular	22.5	30.51
Os02t0643800-01	Rice	mitochondrion	35.62	30.0
CDY48020	Canola	cytosol	11.88	29.69
EES11187	Sorghum	mitochondrion	31.88	29.14
CDY28827	Canola	cytosol	23.12	28.91
Zm00001d002826_P001	Maize	mitochondrion	31.88	28.65
Zm00001d025947_P001	Maize	mitochondrion	31.25	28.57
Zm00001d051302_P001	Maize	mitochondrion	35.0	28.14
Zm00001d017397_P001	Maize	mitochondrion	34.38	27.78
EES07542	Sorghum	mitochondrion	35.62	27.54
CDY51792	Canola	cytosol	21.88	27.34
CDY20244	Canola	cytosol	22.5	26.87
CDY14366	Canola	cytosol	23.12	24.67

Protein Annotations

EnsemblPlants:CDX79167	EnsemblPlantsGene:GSBRNA2T00131733001	GO:A0A078CR19	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	ProteinID:CDX79167	ProteinID:CDX79167.1
UniParc:UPI0002545745	MapMan:35.1	:	:	:	:

Description

BnaA01g12340D

Coordinates

chrLK031816:+:2121552..2122228

Molecular Weight (calculated)

18394.9 Da

IEP (calculated)

11.658

GRAVY (calculated)

-0.337

Length

160 amino acids

Sequence
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRIQTGK RQCLTGILNP VQKICSLARC LRRGANRLCG GKKTGQTRLG NEPKPAAVPK GHLVVHVGEA GDDTRRVVVP
101: VIYFNHPLFG ELLEQAERVY GFEQSGRITI PCRVSDFEKV QMRIAAWDRC RQKRTFKIIL

Best Arabidopsis Sequence Match ( AT4G22620.1 )
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.