CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000772.1-P	Field mustard	mitochondrion	100.0	100.0
CDY21268	Canola	mitochondrion	96.36	96.36
CDY52310	Canola	mitochondrion	84.85	87.5
CDY65616	Canola	cytosol	45.45	87.21
CDX86707	Canola	mitochondrion	84.24	86.88
AT4G12410.1	Thale cress	mitochondrion	80.61	84.71
CDX97341	Canola	mitochondrion	72.12	81.51
CDX79167	Canola	mitochondrion	72.73	75.0
CDX94106	Canola	mitochondrion	69.09	75.0
CDX98761	Canola	mitochondrion	69.09	75.0
CDY71452	Canola	mitochondrion	71.52	74.21
CDX76364	Canola	mitochondrion	70.3	72.96
PGSC0003DMT400032631	Potato	cytosol	28.48	51.09
PGSC0003DMT400012211	Potato	mitochondrion	35.76	48.36
Solyc08g079130.1.1	Tomato	mitochondrion	38.18	47.01
GSMUA_Achr5P15270_001	Banana	mitochondrion	23.03	46.91
KRH04072	Soybean	cytosol	33.33	45.83
KRH57344	Soybean	mitochondrion	32.73	44.63
PGSC0003DMT400012209	Potato	mitochondrion	43.64	43.9
Solyc08g079150.1.1	Tomato	mitochondrion	42.42	43.21
CDX89071	Canola	mitochondrion	43.03	41.76
CDX89069	Canola	mitochondrion	43.03	41.76
VIT_02s0154g00010.t01	Wine grape	mitochondrion	41.21	41.72
Solyc08g079140.1.1	Tomato	mitochondrion	36.97	41.22
CDY48371	Canola	mitochondrion	41.82	40.59
PGSC0003DMT400012210	Potato	mitochondrion	36.36	40.54
GSMUA_Achr1P01750_001	Banana	mitochondrion	41.21	39.31
CDX71789	Canola	mitochondrion	40.0	38.82
CDY41147	Canola	mitochondrion	40.0	38.82
CDX95639	Canola	mitochondrion	36.36	37.27
CDX95640	Canola	mitochondrion	36.36	37.27
CDX83393	Canola	mitochondrion	36.36	37.27
CDY11381	Canola	cytosol	25.45	35.29
CDY47081	Canola	cytosol	18.18	34.88
Os04t0537100-01	Rice	mitochondrion	34.55	34.13
CDX76596	Canola	nucleus	24.24	33.61
TraesCS2A01G386400.1	Wheat	mitochondrion	33.33	33.13
HORVU2Hr1G092070.1	Barley	mitochondrion	32.73	32.73
TraesCS6B01G286100.1	Wheat	mitochondrion	35.76	32.24
TraesCS2B01G403800.1	Wheat	mitochondrion	32.12	31.93
TraesCS6D01G220700.1	Wheat	mitochondrion	35.15	31.87
TraesCS2D01G383200.1	Wheat	mitochondrion	30.91	31.48
TraesCS6A01G238300.1	Wheat	mitochondrion	35.15	31.35
CDY41548	Canola	cytosol	23.03	31.15
CDY07152	Canola	cytosol	24.85	30.83
Os02t0643800-01	Rice	mitochondrion	35.15	30.53
CDY53473	Canola	extracellular	21.82	30.51
CDX80039	Canola	cytosol	22.42	30.33
EES11187	Sorghum	mitochondrion	32.12	30.29
CDY48020	Canola	cytosol	11.52	29.69
Zm00001d017397_P001	Maize	mitochondrion	34.55	28.79
Zm00001d002826_P001	Maize	mitochondrion	30.91	28.65
Zm00001d025947_P001	Maize	mitochondrion	30.3	28.57
EES07542	Sorghum	mitochondrion	35.76	28.5
CDY28827	Canola	cytosol	21.82	28.12
CDY51792	Canola	cytosol	21.21	27.34
CDY20244	Canola	cytosol	21.82	26.87
Zm00001d051302_P001	Maize	mitochondrion	32.12	26.63
CDY14366	Canola	cytosol	22.42	24.67

Protein Annotations

EnsemblPlants:CDX90829	EnsemblPlantsGene:GSBRNA2T00151539001	GO:A0A078DQS9	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	ProteinID:CDX90829	ProteinID:CDX90829.1
UniParc:UPI000253FCF6	MapMan:35.1	:	:	:	:

Description

BnaA03g25090D

Coordinates

chrLK031864:-:731143..731640

Molecular Weight (calculated)

18885.3 Da

IEP (calculated)

11.885

GRAVY (calculated)

-0.521

Length

165 amino acids

Sequence
(BLAST)

001: MKRVRGFKIG HRFVKIFRWI RSKRTQTMKR QCPTRITNPI AGIRSLARSL SGRAKRLCGG KKNSGQSQIR LGKDPRTSAS IKVVPKGHLV VHVGESDGDT
101: RRVVVPVIYF NHPLFGELLE QAERVHGFDQ PGQITIPCRV SDFEKVQMRI AAWDHCRRKS NYKIL

Best Arabidopsis Sequence Match ( AT4G12410.1 )
(BLAST)

001: MKRVRGFKIG HRFVKIFKWI PRNRCPTRIT NPVTGIRSLA RCLSRGAKRL CGGSKKNPGQ NQIRLGKDPK KSNRVVPRGH LVVHVGESDD DTRRVVVPVI
101: YFNHPLFGEL LEQAERVHGF DQPGRITIPC RVSDFEKVQL RIAAWDHCRR KNSYKII

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9STH0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.