CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018478.1-P	Field mustard	mitochondrion	100.0	100.0
CDX90829	Canola	mitochondrion	81.51	72.12
CDY21268	Canola	mitochondrion	80.82	71.52
CDY52310	Canola	mitochondrion	78.08	71.25
AT4G12410.1	Thale cress	mitochondrion	76.03	70.7
CDX86707	Canola	mitochondrion	77.4	70.62
CDY65616	Canola	cytosol	39.73	67.44
CDX79167	Canola	mitochondrion	69.86	63.75
CDY71452	Canola	mitochondrion	69.18	63.52
CDX94106	Canola	mitochondrion	65.75	63.16
CDX98761	Canola	mitochondrion	65.75	63.16
CDX76364	Canola	mitochondrion	67.12	61.64
KRH04072	Soybean	cytosol	34.93	42.5
KRH57344	Soybean	mitochondrion	34.25	41.32
PGSC0003DMT400012211	Potato	mitochondrion	34.25	40.98
PGSC0003DMT400032631	Potato	cytosol	25.34	40.22
GSMUA_Achr5P15270_001	Banana	mitochondrion	21.23	38.27
Solyc08g079130.1.1	Tomato	mitochondrion	34.93	38.06
PGSC0003DMT400012209	Potato	mitochondrion	42.47	37.8
Solyc08g079150.1.1	Tomato	mitochondrion	41.1	37.04
VIT_02s0154g00010.t01	Wine grape	mitochondrion	40.41	36.2
CDX89069	Canola	mitochondrion	41.78	35.88
CDX89071	Canola	mitochondrion	41.78	35.88
PGSC0003DMT400012210	Potato	mitochondrion	36.3	35.81
Solyc08g079140.1.1	Tomato	mitochondrion	36.3	35.81
CDY48371	Canola	mitochondrion	40.41	34.71
CDX71789	Canola	mitochondrion	39.73	34.12
CDY41147	Canola	mitochondrion	39.73	34.12
CDX95639	Canola	mitochondrion	36.3	32.92
CDX83393	Canola	mitochondrion	36.3	32.92
CDX95640	Canola	mitochondrion	36.3	32.92
CDY47081	Canola	cytosol	19.18	32.56
GSMUA_Achr1P01750_001	Banana	mitochondrion	38.36	32.37
CDY11381	Canola	cytosol	24.66	30.25
TraesCS2A01G386400.1	Wheat	mitochondrion	33.56	29.52
CDX76596	Canola	nucleus	23.97	29.41
Os04t0537100-01	Rice	mitochondrion	33.56	29.34
TraesCS2B01G403800.1	Wheat	mitochondrion	32.88	28.92
HORVU2Hr1G092070.1	Barley	mitochondrion	32.19	28.48
TraesCS2D01G383200.1	Wheat	mitochondrion	31.51	28.4
CDY53473	Canola	extracellular	22.6	27.97
TraesCS6B01G286100.1	Wheat	mitochondrion	34.93	27.87
TraesCS6D01G220700.1	Wheat	mitochondrion	34.25	27.47
CDY07152	Canola	cytosol	24.66	27.07
CDY41548	Canola	cytosol	22.6	27.05
TraesCS6A01G238300.1	Wheat	mitochondrion	34.25	27.03
EES11187	Sorghum	mitochondrion	32.19	26.86
Os02t0643800-01	Rice	mitochondrion	34.93	26.84
Zm00001d017397_P001	Maize	mitochondrion	35.62	26.26
CDX80039	Canola	cytosol	21.92	26.23
Zm00001d002826_P001	Maize	mitochondrion	31.51	25.84
CDY28827	Canola	cytosol	22.6	25.78
Zm00001d025947_P001	Maize	mitochondrion	30.82	25.71
Zm00001d051302_P001	Maize	mitochondrion	34.93	25.63
EES07542	Sorghum	mitochondrion	36.3	25.6
CDY48020	Canola	cytosol	10.96	25.0
CDY51792	Canola	cytosol	21.92	25.0
CDY20244	Canola	cytosol	22.6	24.63
CDY14366	Canola	cytosol	22.6	22.0

Protein Annotations

EnsemblPlants:CDX97341	EnsemblPlantsGene:GSBRNA2T00104423001	GO:A0A078E812	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	ProteinID:CDX97341	ProteinID:CDX97341.1
UniParc:UPI000254802C	MapMan:35.1	:	:	:	:

Description

BnaA02g21320D

Coordinates

chrLK031898:+:1177038..1177478

Molecular Weight (calculated)

16603.4 Da

IEP (calculated)

11.211

GRAVY (calculated)

-0.370

Length

146 amino acids

Sequence
(BLAST)

001: MERVIGFKIG HRFVKIFKWT RCRRTQTNKR QCRTRITNPI TGIRSLARCL SRGAKRLCGG EKISGNSKIR LGKDPNASLS MNVVPKRHLV VHVGESDGDT
101: RRVVVPLIYF NHPLFGELLE QAELVDGFDQ PGRITITCRV SDFEKV

Best Arabidopsis Sequence Match ( AT4G12410.1 )
(BLAST)

001: MKRVRGFKIG HRFVKIFKWI PRNRCPTRIT NPVTGIRSLA RCLSRGAKRL CGGSKKNPGQ NQIRLGKDPK KSNRVVPRGH LVVHVGESDD DTRRVVVPVI
101: YFNHPLFGEL LEQAERVHGF DQPGRITIPC RVSDFEKVQL RIAAWDHCRR KNSYKII

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9STH0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.