CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014476.1-P	Field mustard	mitochondrion	97.06	97.06
CDX89069	Canola	mitochondrion	97.06	97.06
CDX89071	Canola	mitochondrion	96.47	96.47
CDX71789	Canola	mitochondrion	88.82	88.82
CDY41147	Canola	mitochondrion	87.06	87.06
AT3G60690.1	Thale cress	mitochondrion	86.47	86.47
CDX83393	Canola	mitochondrion	55.88	59.01
CDX95640	Canola	mitochondrion	55.88	59.01
CDX95639	Canola	mitochondrion	55.29	58.39
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.88	54.32
KRH75321	Soybean	mitochondrion	49.41	51.85
CDY65616	Canola	cytosol	24.71	48.84
VIT_15s0048g00530.t01	Wine grape	mitochondrion	48.82	48.26
Solyc01g091030.2.1	Tomato	mitochondrion	44.71	47.8
PGSC0003DMT400066911	Potato	mitochondrion	44.71	47.8
PGSC0003DMT400003228	Potato	mitochondrion	38.24	47.1
Solyc10g018340.1.1	Tomato	mitochondrion	35.88	44.2
CDY52310	Canola	mitochondrion	41.18	43.75
CDX86707	Canola	mitochondrion	41.18	43.75
CDY71452	Canola	mitochondrion	40.59	43.4
KRH76182	Soybean	mitochondrion	42.35	42.86
GSMUA_Achr1P01750_001	Banana	mitochondrion	43.53	42.77
CDX76364	Canola	mitochondrion	40.0	42.77
CDX79167	Canola	mitochondrion	40.0	42.5
CDY21268	Canola	mitochondrion	41.18	42.42
KRH65356	Soybean	mitochondrion	42.35	42.35
CDX90829	Canola	mitochondrion	40.59	41.82
CDX97341	Canola	mitochondrion	34.71	40.41
TraesCS2A01G386400.1	Wheat	mitochondrion	38.24	39.16
Os04t0537100-01	Rice	mitochondrion	38.24	38.92
TraesCS2D01G383200.1	Wheat	mitochondrion	37.06	38.89
HORVU2Hr1G092070.1	Barley	mitochondrion	37.65	38.79
TraesCS2B01G403800.1	Wheat	mitochondrion	37.65	38.55
CDX98761	Canola	mitochondrion	33.53	37.5
CDX94106	Canola	mitochondrion	33.53	37.5
CDY47081	Canola	cytosol	18.82	37.21
TraesCS6B01G286100.1	Wheat	mitochondrion	40.0	37.16
TraesCS6D01G220700.1	Wheat	mitochondrion	39.41	36.81
Os02t0643800-01	Rice	mitochondrion	40.59	36.32
TraesCS6A01G238300.1	Wheat	mitochondrion	39.41	36.22
CDX76596	Canola	nucleus	24.71	35.29
CDY11381	Canola	cytosol	24.71	35.29
EES11187	Sorghum	mitochondrion	35.88	34.86
Zm00001d025947_P001	Maize	mitochondrion	35.88	34.86
Zm00001d017397_P001	Maize	mitochondrion	40.59	34.85
Zm00001d002826_P001	Maize	mitochondrion	35.88	34.27
Zm00001d051302_P001	Maize	mitochondrion	38.82	33.17
CDY07152	Canola	cytosol	24.71	31.58
EES07542	Sorghum	mitochondrion	38.24	31.4
CDY53473	Canola	extracellular	21.76	31.36
CDY41548	Canola	cytosol	22.35	31.15
CDX80039	Canola	cytosol	21.76	30.33
CDY48020	Canola	cytosol	11.18	29.69
CDY51792	Canola	cytosol	21.76	28.91
CDY28827	Canola	cytosol	21.18	28.12
CDY20244	Canola	cytosol	21.18	26.87
CDY14366	Canola	cytosol	21.76	24.67

Protein Annotations

EnsemblPlants:CDY48371	EnsemblPlantsGene:GSBRNA2T00089362001	GO:A0A078IEB9	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF56	PFAM:PF02519	ProteinID:CDY48371	ProteinID:CDY48371.1
UniParc:UPI0004EEF02E	UniProt:A0A078IEB9	MapMan:35.1	:	:	:

Description

BnaC04g22040DBnaC04g22040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEB9]

Coordinates

chrLK032768:+:94691..95478

Molecular Weight (calculated)

19873.3 Da

IEP (calculated)

11.505

GRAVY (calculated)

-0.631

Length

170 amino acids

Sequence
(BLAST)

001: MRRLRGIKIR RPFQRITRWI LRKTRLRRSR YIRLSPNRPV CKPKAIAKLI SWGRSLTSHS ARFLGYKRSN SGYIPIGEEP VQTKPDPVPK GHSAVYVGKK
101: DGDFHRVLVP IVYFNHPLFG ELLREAEEEF GFCQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRRQ

Best Arabidopsis Sequence Match ( AT3G60690.1 )
(BLAST)

001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ

Arabidopsis Description

AT3g60690/T4C21_100 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.