CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
extracellular 3
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47081	Canola	cytosol	68.64	94.19
CDY28827	Canola	cytosol	88.14	81.25
CDY51792	Canola	cytosol	88.14	81.25
CDY20244	Canola	cytosol	88.14	77.61
AT5G53590.1	Thale cress	cytosol	85.59	71.13
CDY14366	Canola	cytosol	79.66	62.67
CDY48020	Canola	cytosol	27.12	50.0
TraesCS1B01G201800.1	Wheat	cytosol	40.68	44.86
CDX76596	Canola	nucleus	44.07	43.7
CDX80039	Canola	cytosol	44.92	43.44
CDY41548	Canola	cytosol	44.07	42.62
Os10t0510500-01	Rice	cytosol	44.92	42.4
CDY07152	Canola	cytosol	47.46	42.11
CDY11381	Canola	cytosol	42.37	42.02
HORVU1Hr1G047390.1	Barley	cytosol	42.37	41.67
TraesCS1D01G177000.1	Wheat	cytosol	42.37	41.32
CDY65616	Canola	cytosol	29.66	40.7
Zm00001d013869_P001	Maize	cytosol	44.07	40.0
EER91385	Sorghum	cytosol, mitochondrion, plastid	45.76	39.71
TraesCS1A01G178700.1	Wheat	mitochondrion	40.68	39.67
Zm00001d032475_P001	Maize	cytosol	39.83	36.43
HORVU1Hr1G072420.1	Barley	cytosol	21.19	29.41
CDX98761	Canola	mitochondrion	30.51	23.68
CDY71452	Canola	mitochondrion	31.36	23.27
CDX94106	Canola	mitochondrion	29.66	23.03
CDX76364	Canola	mitochondrion	30.51	22.64
CDX97341	Canola	mitochondrion	27.97	22.6
CDX86707	Canola	mitochondrion	30.51	22.5
CDY52310	Canola	mitochondrion	30.51	22.5
CDX79167	Canola	mitochondrion	30.51	22.5
CDX95640	Canola	mitochondrion	30.51	22.36
CDX95639	Canola	mitochondrion	30.51	22.36
CDX83393	Canola	mitochondrion	30.51	22.36
CDY21268	Canola	mitochondrion	30.51	21.82
CDX90829	Canola	mitochondrion	30.51	21.82
CDY48371	Canola	mitochondrion	31.36	21.76
CDY41147	Canola	mitochondrion	31.36	21.76
CDX89071	Canola	mitochondrion	31.36	21.76
CDX89069	Canola	mitochondrion	31.36	21.76
CDX71789	Canola	mitochondrion	31.36	21.76

Protein Annotations

EnsemblPlants:CDY53473	EnsemblPlantsGene:GSBRNA2T00010795001	GO:A0A078IWU7	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF29	PFAM:PF02519	ProteinID:CDY53473	ProteinID:CDY53473.1
SEG:seg	UniParc:UPI0004EB2C74	UniProt:A0A078IWU7	MapMan:35.1	:	:

Description

BnaC03g14890DBnaC03g14890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWU7]

Coordinates

chrLK033207:+:14243..14599

Molecular Weight (calculated)

13711.4 Da

IEP (calculated)

7.246

GRAVY (calculated)

-0.460

Length

118 amino acids

Sequence
(BLAST)

001: MSKQMVFNFH FHVPHLHILH HHNHVPKGCV AIMVGHEGDE EGLHRFVVPL MFLSHPLFAS LLKEAEEEYG FKHAGPITIP CRVNEFKHVQ EIIDQETHGR
101: HSHGNGHNHH HNNHLRCF

Best Arabidopsis Sequence Match ( AT5G53590.1 )
(BLAST)

001: MGFEENQKQS PKQSPNHIKH MVFKFHFHVP HLHILPHHHH HHHHDVPKGC VAIMVGHEDD EEGLHRFVVP LVFLSHPLFL DLLKEAEKEY GFKHDGPITI
101: PCGVDEFKHV QEVIDEETHR RHSHGGHGHN NHNHHNNHLR CF

Arabidopsis Description

At5g53590 [Source:UniProtKB/TrEMBL;Acc:Q6NPG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.