Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G201800.1 | Wheat | cytosol | 87.6 | 99.07 |
| TraesCS1A01G178700.1 | Wheat | mitochondrion | 97.52 | 97.52 |
| HORVU1Hr1G047390.1 | Barley | cytosol | 95.04 | 95.83 |
| Zm00001d032475_P001 | Maize | cytosol | 76.03 | 71.32 |
| EER91385 | Sorghum | cytosol, mitochondrion, plastid | 79.34 | 70.59 |
| Os10t0510500-01 | Rice | cytosol | 72.73 | 70.4 |
| Zm00001d013869_P001 | Maize | cytosol | 72.73 | 67.69 |
| HORVU1Hr1G072420.1 | Barley | cytosol | 41.32 | 58.82 |
| CDY47081 | Canola | cytosol | 35.54 | 50.0 |
| CDY53473 | Canola | extracellular | 41.32 | 42.37 |
| CDY51792 | Canola | cytosol | 42.15 | 39.84 |
| CDY28827 | Canola | cytosol | 42.15 | 39.84 |
| TraesCS7D01G381000.1 | Wheat | mitochondrion | 42.98 | 39.69 |
| Bra022663.1-P | Field mustard | cytosol | 41.32 | 39.06 |
| CDY20244 | Canola | cytosol | 41.32 | 37.31 |
| TraesCS6D01G307900.1 | Wheat | cytosol | 32.23 | 34.21 |
| AT5G53590.1 | Thale cress | cytosol | 39.67 | 33.8 |
| Bra003044.1-P | Field mustard | cytosol | 39.67 | 32.0 |
| CDY14366 | Canola | cytosol | 39.67 | 32.0 |
| TraesCS6D01G307800.1 | Wheat | cytosol | 32.23 | 31.45 |
| TraesCS6D01G308000.1 | Wheat | cytosol | 29.75 | 30.77 |
| TraesCS6D01G307600.1 | Wheat | cytosol | 31.41 | 30.65 |
| TraesCS6D01G220700.1 | Wheat | mitochondrion | 28.1 | 18.68 |
| TraesCS2D01G383200.1 | Wheat | mitochondrion | 23.14 | 17.28 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G177000.1 | EnsemblPlantsGene:TraesCS1D01G177000 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF53 | PFAM:PF02519 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:+:252301688..252302053
Molecular Weight (calculated)
13658.4 Da
IEP (calculated)
7.737
GRAVY (calculated)
-0.403
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLRQQQQQH HRAEMVAPKG CVTVRVGAEG EEQRRFAVPL DHLKHPLFGA LLDEAEREYG FRHQGAIAIP CRVDRFVHVE RLIDRDLGAH GHQLVDLDCG
101: AATAHGHGHL HLPRFVGCFR A
101: AATAHGHGHL HLPRFVGCFR A
001: MGSGEKILKS VHSNRPNNVK SNSKHGIKDV PKGCLAIKVG SKEEEKQRFV VPVFYFNHPL FMQLLREAEE EYGFEQKGTI TIPCHVEVFR YVQDMINRER
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M275]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.