Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G201800.1 | Wheat | cytosol | 66.4 | 77.57 |
| TraesCS1D01G177000.1 | Wheat | cytosol | 70.4 | 72.73 |
| TraesCS1A01G178700.1 | Wheat | mitochondrion | 70.4 | 72.73 |
| HORVU1Hr1G047390.1 | Barley | cytosol | 69.6 | 72.5 |
| Zm00001d013869_P001 | Maize | cytosol | 75.2 | 72.31 |
| EER91385 | Sorghum | cytosol, mitochondrion, plastid | 74.4 | 68.38 |
| Zm00001d032475_P001 | Maize | cytosol | 69.6 | 67.44 |
| CDY47081 | Canola | cytosol | 36.0 | 52.33 |
| HORVU1Hr1G072420.1 | Barley | cytosol | 33.6 | 49.41 |
| CDY53473 | Canola | extracellular | 42.4 | 44.92 |
| CDY51792 | Canola | cytosol | 42.4 | 41.41 |
| CDY28827 | Canola | cytosol | 42.4 | 41.41 |
| Bra022663.1-P | Field mustard | cytosol | 41.6 | 40.62 |
| CDY20244 | Canola | cytosol | 41.6 | 38.81 |
| Os06t0714300-01 | Rice | plasma membrane | 40.8 | 36.17 |
| AT5G53590.1 | Thale cress | cytosol | 40.8 | 35.92 |
| CDY14366 | Canola | cytosol | 39.2 | 32.67 |
| Bra003044.1-P | Field mustard | cytosol | 39.2 | 32.67 |
| Os02t0769100-01 | Rice | cytosol | 29.6 | 28.91 |
| Os04t0537100-01 | Rice | mitochondrion | 24.0 | 17.96 |
| Os02t0643800-01 | Rice | mitochondrion | 26.4 | 17.37 |
Protein Annotations
| EnsemblPlants:Os10t0510500-01 | EnsemblPlantsGene:Os10g0510500 | EntrezGene:4349090 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF53 | PFAM:PF02519 | ProteinID:BAF26951.1 | ProteinID:BAT11618.1 |
| ProteinID:EEE51257.1 | RefSeq:XP_015612908.1 | SEG:seg | UniParc:UPI00005E1F54 | UniProt:Q0IWG4 | MapMan:35.1 |
Description
SMALL AUXIN-UP RNA 56Auxin responsive SAUR protein family protein. (Os10t0510500-01)
Coordinates
chr10:-:19631259..19632262
Molecular Weight (calculated)
13937.7 Da
IEP (calculated)
7.810
GRAVY (calculated)
-0.290
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MHGKHQHQQQ QQQQGGMVVV APKGCVTVRV GAEGEEQRRF AVPLAHLKHP LFGALLEEAE REYGFAQRGA IAIPCRVDRF VHVEHLIVQD LHGAAASHLL
101: DLDSSSHHHT QIHLHLPRFA GCFRA
101: DLDSSSHHHT QIHLHLPRFA GCFRA
001: MGNGDKVMSH WSFHIPRLHH HEHDHEKVPK GCLAVKVGQG EEQERFVIPV MYFNHPLFGQ LLKEAEEEFG FAQKGTITIP CHVEEFRYVQ GLIDRENTRF
101: LGTNLLDHHH HHHNHLIRCF RV
101: LGTNLLDHHH HHHNHLIRCF RV
Arabidopsis Description
AT4g00880 protein [Source:UniProtKB/TrEMBL;Acc:O23089]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.