CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003044.1-P	Field mustard	cytosol	99.33	99.33
CDY20244	Canola	cytosol	74.67	83.58
CDY53473	Canola	extracellular	62.67	79.66
CDY47081	Canola	cytosol	44.0	76.74
CDY28827	Canola	cytosol	64.0	75.0
CDY51792	Canola	cytosol	64.0	75.0
AT5G53590.1	Thale cress	cytosol	66.0	69.72
TraesCS1B01G201800.1	Wheat	cytosol	30.67	42.99
CDX76596	Canola	nucleus	33.33	42.02
CDY65616	Canola	cytosol	24.0	41.86
CDX80039	Canola	cytosol	34.0	41.8
CDY11381	Canola	cytosol	32.67	41.18
CDY41548	Canola	cytosol	33.33	40.98
CDY48020	Canola	cytosol	17.33	40.62
HORVU1Hr1G047390.1	Barley	cytosol	32.0	40.0
CDY07152	Canola	cytosol	35.33	39.85
TraesCS1D01G177000.1	Wheat	cytosol	32.0	39.67
Os10t0510500-01	Rice	cytosol	32.67	39.2
TraesCS1A01G178700.1	Wheat	mitochondrion	30.67	38.02
Zm00001d013869_P001	Maize	cytosol	32.0	36.92
EER91385	Sorghum	cytosol, mitochondrion, plastid	33.33	36.76
Zm00001d032475_P001	Maize	cytosol	30.0	34.88
HORVU1Hr1G072420.1	Barley	cytosol	17.33	30.59
CDX98761	Canola	mitochondrion	24.67	24.34
CDY71452	Canola	mitochondrion	25.33	23.9
CDX94106	Canola	mitochondrion	24.0	23.68
CDX76364	Canola	mitochondrion	24.67	23.27
CDX79167	Canola	mitochondrion	24.67	23.12
CDY52310	Canola	mitochondrion	24.67	23.12
CDX86707	Canola	mitochondrion	24.67	23.12
CDX95640	Canola	mitochondrion	24.67	22.98
CDX95639	Canola	mitochondrion	24.67	22.98
CDX83393	Canola	mitochondrion	24.67	22.98
CDX97341	Canola	mitochondrion	22.0	22.6
CDY21268	Canola	mitochondrion	24.67	22.42
CDX90829	Canola	mitochondrion	24.67	22.42
CDY41147	Canola	mitochondrion	25.33	22.35
CDX71789	Canola	mitochondrion	25.33	22.35
CDX89069	Canola	mitochondrion	24.67	21.76
CDX89071	Canola	mitochondrion	24.67	21.76
CDY48371	Canola	mitochondrion	24.67	21.76

Protein Annotations

EnsemblPlants:CDY14366	EnsemblPlantsGene:GSBRNA2T00078991001	GO:A0A078FMP2	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF29	PFAM:PF02519	ProteinID:CDY14366	ProteinID:CDY14366.1
SEG:seg	UniParc:UPI0004EE5240	UniProt:A0A078FMP2	MapMan:35.1	:	:

Description

BnaA10g06890DBnaA10g06890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMP2]

Coordinates

chrLK032042:-:389604..390214

Molecular Weight (calculated)

17558.8 Da

IEP (calculated)

6.215

GRAVY (calculated)

-0.489

Length

150 amino acids

Sequence
(BLAST)

001: MGFEDQEEQK QSQSQMVLKF HFHVPHLHIH HHHNHHHVPK GCVAIMVGHE GDEEGLHRFV VPLMFLSHPL FLSLLKEAEE EYGFKHAGPI TIPCRVDEFK
101: HVQEIIDEET HRRHISDDDD EKQRVIECEC FSSITNEIVR STKFQFVVVG

Best Arabidopsis Sequence Match ( AT5G53590.1 )
(BLAST)

001: MGFEENQKQS PKQSPNHIKH MVFKFHFHVP HLHILPHHHH HHHHDVPKGC VAIMVGHEDD EEGLHRFVVP LVFLSHPLFL DLLKEAEKEY GFKHDGPITI
101: PCGVDEFKHV QEVIDEETHR RHSHGGHGHN NHNHHNNHLR CF

Arabidopsis Description

At5g53590 [Source:UniProtKB/TrEMBL;Acc:Q6NPG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.