CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020841.1-P	Field mustard	mitochondrion	100.0	100.0
CDY71452	Canola	mitochondrion	89.31	89.31
CDX79167	Canola	mitochondrion	89.31	88.75
AT4G22620.1	Thale cress	mitochondrion	86.16	85.62
CDX94106	Canola	mitochondrion	81.13	84.87
CDX98761	Canola	mitochondrion	79.87	83.55
CDY65616	Canola	cytosol	43.4	80.23
CDY52310	Canola	mitochondrion	76.73	76.25
CDX86707	Canola	mitochondrion	75.47	75.0
CDY21268	Canola	mitochondrion	73.58	70.91
CDX90829	Canola	mitochondrion	72.96	70.3
CDX97341	Canola	mitochondrion	61.64	67.12
PGSC0003DMT400012211	Potato	mitochondrion	40.25	52.46
PGSC0003DMT400032631	Potato	cytosol	29.56	51.09
GSMUA_Achr5P15270_001	Banana	mitochondrion	25.16	49.38
KRH04072	Soybean	cytosol	36.48	48.33
Solyc08g079130.1.1	Tomato	mitochondrion	40.25	47.76
KRH57344	Soybean	mitochondrion	35.85	47.11
Solyc08g079150.1.1	Tomato	mitochondrion	47.17	46.3
PGSC0003DMT400012209	Potato	mitochondrion	47.17	45.73
VIT_02s0154g00010.t01	Wine grape	mitochondrion	45.91	44.79
Solyc08g079140.1.1	Tomato	mitochondrion	40.88	43.92
PGSC0003DMT400012210	Potato	mitochondrion	39.62	42.57
CDX89071	Canola	mitochondrion	42.77	40.0
CDX89069	Canola	mitochondrion	42.77	40.0
CDY48371	Canola	mitochondrion	42.77	40.0
CDX95640	Canola	mitochondrion	40.25	39.75
CDX83393	Canola	mitochondrion	40.25	39.75
CDX95639	Canola	mitochondrion	39.62	39.13
CDY41147	Canola	mitochondrion	41.51	38.82
CDX71789	Canola	mitochondrion	40.88	38.24
GSMUA_Achr1P01750_001	Banana	mitochondrion	40.88	37.57
CDY11381	Canola	cytosol	27.67	36.97
Os04t0537100-01	Rice	mitochondrion	37.11	35.33
CDX76596	Canola	nucleus	26.42	35.29
CDY47081	Canola	cytosol	18.87	34.88
TraesCS2A01G386400.1	Wheat	mitochondrion	35.85	34.34
HORVU2Hr1G092070.1	Barley	mitochondrion	35.22	33.94
TraesCS2B01G403800.1	Wheat	mitochondrion	35.22	33.73
TraesCS2D01G383200.1	Wheat	mitochondrion	33.96	33.33
CDY07152	Canola	cytosol	27.04	32.33
TraesCS6B01G286100.1	Wheat	mitochondrion	37.11	32.24
CDY41548	Canola	cytosol	24.53	31.97
TraesCS6D01G220700.1	Wheat	mitochondrion	36.48	31.87
TraesCS6A01G238300.1	Wheat	mitochondrion	36.48	31.35
CDY48020	Canola	cytosol	12.58	31.25
CDX80039	Canola	cytosol	23.9	31.15
Os02t0643800-01	Rice	mitochondrion	37.11	31.05
EES11187	Sorghum	mitochondrion	33.96	30.86
CDY53473	Canola	extracellular	22.64	30.51
Zm00001d002826_P001	Maize	mitochondrion	33.96	30.34
Zm00001d025947_P001	Maize	mitochondrion	33.33	30.29
Zm00001d051302_P001	Maize	mitochondrion	37.11	29.65
CDY28827	Canola	cytosol	23.27	28.91
Zm00001d017397_P001	Maize	mitochondrion	35.85	28.79
EES07542	Sorghum	mitochondrion	36.48	28.02
CDY51792	Canola	cytosol	22.01	27.34
CDY20244	Canola	cytosol	22.64	26.87
CDY14366	Canola	cytosol	23.27	24.67

Protein Annotations

EnsemblPlants:CDX76364	EnsemblPlantsGene:GSBRNA2T00126749001	GO:A0A078CJY0	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	ProteinID:CDX76364	ProteinID:CDX76364.1
UniParc:UPI0002545E12	MapMan:35.1	:	:	:	:

Description

BnaA08g10360D

Coordinates

chrLK031807:-:695703..696182

Molecular Weight (calculated)

18377.9 Da

IEP (calculated)

11.341

GRAVY (calculated)

-0.413

Length

159 amino acids

Sequence
(BLAST)

001: MKRLRGFKIG HRLVKIFKWI IRTRRIQTGK RQCLTGLLNP VPKIYSLARC LRRGANTLCG GKKTGQTRLG NEPKPQAVPK GHLVVHVGEC GDDTRRVVVP
101: VVYFNHPLFG ELLEEKERVY GFDQPGRITI PCRVSDFEKV QMRIAAWDHC RRKRAFKIF

Best Arabidopsis Sequence Match ( AT4G22620.1 )
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.