Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 4
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
18260611
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G091350.1 | Barley | mitochondrion, plastid | 66.67 | 71.76 |
| TraesCS7B01G287200.1 | Wheat | mitochondrion | 66.67 | 71.76 |
| TraesCS7D01G381000.1 | Wheat | mitochondrion | 66.67 | 71.76 |
| TraesCS7A01G384600.1 | Wheat | mitochondrion | 65.96 | 70.99 |
| Zm00001d036415_P001 | Maize | cytosol | 63.83 | 69.23 |
| EER90388 | Sorghum | cytosol, mitochondrion, nucleus, peroxisome, plastid | 70.92 | 68.97 |
| Zm00001d014774_P001 | Maize | plastid | 63.83 | 62.07 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 43.26 | 53.51 |
| GSMUA_Achr1P07810_001 | Banana | mitochondrion | 45.39 | 52.03 |
| Os10t0510500-01 | Rice | cytosol | 36.17 | 40.8 |
| Os02t0769100-01 | Rice | cytosol | 28.37 | 31.25 |
| Os04t0537100-01 | Rice | mitochondrion | 25.53 | 21.56 |
| Os02t0643800-01 | Rice | mitochondrion | 26.95 | 20.0 |
Protein Annotations
| EMBL:AK107043 | EnsemblPlants:Os06t0714300-01 | EnsemblPlantsGene:Os06g0714300 | EntrezGene:4342060 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF29 | PFAM:PF02519 | ProteinID:BAD54110.1 |
| ProteinID:BAF20487.1 | ProteinID:BAS99480.1 | RefSeq:XP_015641422.1 | SEG:seg | UniParc:UPI0000446F49 | UniProt:Q5Z7T1 |
| MapMan:35.2 | : | : | : | : | : |
Description
SMALL AUXIN-UP RNA 29Auxin responsive SAUR protein family protein. (Os06t0714300-01)
Coordinates
chr6:-:30314770..30315668
Molecular Weight (calculated)
14185.0 Da
IEP (calculated)
9.448
GRAVY (calculated)
-0.153
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVHLLKRQQ SSASAGGSSA GGGMPPKGCM AVRVVGPGGV GGGGGGAEGE RFVVPVGYLK HPLFVGLLKE AEEEFGFEQK GAITIPCGVD HFRRVQGIIH
101: HQKHHHGGSH GAGGAGAGGL LSGHGSSGHH NNFHIAACFR A
101: HQKHHHGGSH GAGGAGAGGL LSGHGSSGHH NNFHIAACFR A
001: MGSGEKILKS VHSNRPNNVK SNSKHGIKDV PKGCLAIKVG SKEEEKQRFV VPVFYFNHPL FMQLLREAEE EYGFEQKGTI TIPCHVEVFR YVQDMINRER
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
101: SLDDDDDASK QTGCGAKHGL THKIRSRSSS GVWKYP
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M275]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.