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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, mitochondrion, plastid, cytosol, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • cytosol 3
  • mitochondrion 3
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036415_P001 Maize cytosol 82.76 92.31
Zm00001d014774_P001 Maize plastid 82.76 82.76
TraesCS7B01G287200.1 Wheat mitochondrion 65.52 72.52
TraesCS7D01G381000.1 Wheat mitochondrion 65.52 72.52
TraesCS7A01G384600.1 Wheat mitochondrion 64.83 71.76
Os06t0714300-01 Rice plasma membrane 68.97 70.92
HORVU7Hr1G091350.1 Barley mitochondrion, plastid 63.45 70.23
GSMUA_AchrUn_... Banana mitochondrion 44.14 56.14
GSMUA_Achr1P07810_001 Banana mitochondrion 46.9 55.28
EER91385 Sorghum cytosol, mitochondrion, plastid 37.24 39.71
EES05864 Sorghum cytosol 26.9 31.71
EES11187 Sorghum mitochondrion 22.76 18.86
EES07542 Sorghum mitochondrion 26.21 18.36
Protein Annotations
EnsemblPlants:EER90388EnsemblPlantsGene:SORBI_3010G264500GO:GO:0008150GO:GO:0009719GO:GO:0009733InterPro:SAUR_fam
PANTHER:PTHR31374PANTHER:PTHR31374:SF29PFAM:PF02519ProteinID:EER90388ProteinID:EER90388.1RefSeq:XP_002439021.1
SEG:segUniParc:UPI0001A8986AUniProt:C5Z1U7MapMan:35.2::
Description
hypothetical protein
Coordinates
chr10:-:60072648..60073085
Molecular Weight (calculated)
15334.0 Da
IEP (calculated)
8.546
GRAVY (calculated)
-0.610
Length
145 amino acids
Sequence
(BLAST)
001: MGVHRLKKQH SAPSLGGGGS GSGSSSASSM PPKGCMAVRV VGPAGGGRKE EQQEEEEEER FVVPVGYLKH PLFVALLKAA EEEYGFEQKG AITIPCGVDH
101: FRRVQGIIHH QRNHHGSGSS GGGGGGHHGH HHSNHHFHIA GCFRA
Best Arabidopsis Sequence Match ( AT2G46690.1 )
(BLAST)
001: MGTGEKTLKS FQLHRKQSVK VKDVPKGCLA IKVGSQGEEQ QRFIVPVLYF NHPLFMQLLK EAEDEYGFDQ KGTITIPCHV EEFRYVQALI DGERSVYNGN
101: NHHHRHGGRD QYHHLVGCFR A
Arabidopsis Description
SAUR32Auxin-responsive protein SAUR32 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.